Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1570 ATGAAAGGAGGAGCTTCGAAGCGCGAACACAATTTCCGAGCCATGAAGAAGGAACGCCTCAATGAAAACGTAGAAGAAGAGAACGATTCCACAAATCATGAACATGAACAAGATCCCGCTTGTCGCAGAATCATTCGCTCCCAATTTCTCAAACTCAAATCTCTCATTAACGAGAAAAGGGATGACTTGTTGAACACGGATTCGGATAAGTTCGAGTCTATCTTGAACGAGTTCAAGAAATTGCACGACCAAGTTCAAAAGCCGAGAGAGCAAGTTGCAGATGCTGAGGCGCTGCTGGATTTGACACGCACTCTTGTGGGGTCTGTGAAGTCTTTGCTTAATGAGGGTATCTCCCCTGCTCAATTTGTTGGCTGTTTGCTGAAAGACTATGGCCAAGAGGGTACTGAAAATTCAATCGATTGGCAAAAGCTTGGGATGTCTGTATCCCCCATCTTTATGAATGTTCATGGCTGTTGTACCATGCTTGGTCCCATGGAAAATGAGTTGAAGCAACGTAAAGTAGGAGTTCAGAGAAAACAAACAAAGCCAACTGCTGAAAAGGCTAGGCCTGAAGAGCTTGATGAATCCAATGAAGTGGAAAAGGCTGATACGGACAAAAACATGATAACTATGTTTAATGTCATGAAGAAGAACACAAAAGGTGTTCCACTTGAAAGCCTAATTTTGAACAGGACATCTTTTGCCCAGACAGTGGAAAACTTGTTTACCCTATCATTTTTAGTTAAAGAAGGTCGCGCTGACATCCGCGTTGACGAAAATCATTCACACTATGTTGAACCTAGAAATGCTCCGAAGACGCAAGAAACTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTAATGAAGGACATGGTGCCTGAGGGTAAGGAGCTAATGCCACATAGAGGTCAGTTTTCAACAATGGTTGATTCTCAGCCAGAGATGGCTGATGACAATTCTCAACCAGCTTTGTCTGTAACACCTATCAGAAAGTTATCACGGAACCGAGGGCGGATTGTGCAGGAGGAAGGTGTTGTAGAAGAATCTCCTGAATGTGATGAGGAAAATGTTTCCAGAGCAGCTGCAATCCGTAGGTGTAAACGCAAACTTCATTAA 1128 0.4282 MKGGASKREHNFRAMKKERLNENVEEENDSTNHEHEQDPACRRIIRSQFLKLKSLINEKRDDLLNTDSDKFESILNEFKKLHDQVQKPREQVADAEALLDLTRTLVGSVKSLLNEGISPAQFVGCLLKDYGQEGTENSIDWQKLGMSVSPIFMNVHGCCTMLGPMENELKQRKVGVQRKQTKPTAEKARPEELDESNEVEKADTDKNMITMFNVMKKNTKGVPLESLILNRTSFAQTVENLFTLSFLVKEGRADIRVDENHSHYVEPRNAPKTQETYTHFVFRYDYQDWKLMKDMVPEGKELMPHRGQFSTMVDSQPEMADDNSQPALSVTPIRKLSRNRGRIVQEEGVVEESPECDEENVSRAAAIRRCKRKLH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1570 375 Coils Coil 14 34 - -
Lan4g1570 375 MobiDBLite consensus disorder prediction 1 38 - -
Lan4g1570 375 Pfam Nse4 C-terminal 222 300 IPR014854 -
Lan4g1570 375 MobiDBLite consensus disorder prediction 173 199 - -
Lan4g1570 375 PANTHER UNCHARACTERIZED 23 361 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lan4g1570 375 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 23 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1570 Lan-Chr4 24733786 24736776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1570 42 374 Non-SMC Element family AT1G51130 51.143 2.73e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1570 K22825 - gmx:100792117 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0330 20 2273576 2276275 Lan4g1570 4 24733786 24736776 LSH