Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1548 ATGGCTTCGGTAACATCACCCACCACCACCACGAAAGAGATTGTTGTAGATATTTCTCCCTATATCCGAGTCTTCAATGATGGCACCGTTGAAAGGCCCTTACAATCAGCAATAGAACCAGTGCCACCATTGCTTCATGACCCTCAATCTGGAATCTCTTCCAAAGATGTTGTTATCTCATGCAACCCCACAATCTCTGCTCGCCTCTACCTTCCAAAAATCACCAACCAAACTGAAAAAGTTCCTATCTTGGTCTACTTTCATGGTGGTGCATTCTTCACTGGTTCTGCACTCTGCCAATTATTCCATAACCACTTCAACAACTTTGTTCCACAAGTAAATGTGATGGTTGTTTCTGTAGAGTACAGGCTTGCCCCAGAGAACCCTCTTCCTGCATGTTATGATGATTGTTGGGATGCTCTCAAATGGGTCTCTTCCCATCATGACAACAACATCACTAACAAAGAACCATGGTTGATTGAGCATGGTGATTTCAAGAAAGTGTTCATAGGTGGTGATAGTGCTGGGGGTAACATTGTGCATAACATTGCCATGCGTGCTGGGACTGAGGCTTTACCTTGTGGTGTTAAAATATTAGGAGCATTTTTGAGTCACCCTTTCTTCTGTGGTTCACAACCAATTGGATCAGAACCCTTAGGTCATGGTCATATGGCTTGGAACTTGGTGTATCCAAATGCACCTGGTGGGGTTGATAATCCTTTCATCAAACCTTTGGCTGAAGGAGCACCTAGTTTGAGTAAACTTGGGTGTTCTAGAATTCTTGTTTGTGTTGCTGGTAAGGATCAATTGAGAGATAGAGGGATTTTGTACTATGAAGCTGTGAAAAAGAGTGGGTGGCAAGGTGAATTGGAACTGTTTGAAGAGAAAGAGGAGGATCATGTTTATCATGTCATCCAGCCTCAATCTGAGAATGCCAACAAATTGTTCAAACGCTTGGCTTTGTTTATGCTACAGTAG 978 0.4294 MASVTSPTTTTKEIVVDISPYIRVFNDGTVERPLQSAIEPVPPLLHDPQSGISSKDVVISCNPTISARLYLPKITNQTEKVPILVYFHGGAFFTGSALCQLFHNHFNNFVPQVNVMVVSVEYRLAPENPLPACYDDCWDALKWVSSHHDNNITNKEPWLIEHGDFKKVFIGGDSAGGNIVHNIAMRAGTEALPCGVKILGAFLSHPFFCGSQPIGSEPLGHGHMAWNLVYPNAPGGVDNPFIKPLAEGAPSLSKLGCSRILVCVAGKDQLRDRGILYYEAVKKSGWQGELELFEEKEEDHVYHVIQPQSENANKLFKRLALFMLQ* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1548 325 Gene3D alpha/beta hydrolase 3 324 IPR029058 -
Lan4g1548 325 Pfam alpha/beta hydrolase fold 84 303 IPR013094 GO:0016787
Lan4g1548 325 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 10 324 - -
Lan4g1548 325 PANTHER ARYLACETAMIDE DEACETYLASE 10 324 - -
Lan4g1548 325 SUPERFAMILY alpha/beta-Hydrolases 2 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1548 Lan-Chr4 24580097 24581142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1548 13 325 Carbohydrate Esterase AT1G19190 39.375 3.31e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1548 - K13258 aprc:113873855 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0558 8 7777350 7778385 Lan4g1548 4 24580097 24581142 LSH
Lan17g0018 17 100886 102363 Lan4g1548 4 24580097 24581142 PCT