Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1546 ATGGCGATGACGATGGTAGAGAGCATTGTGCTTCTCTTTGTTCTCCTTATGCTTCTTCTTCTCATCATCCTTATCTTCTTCTCCTTCAAACCATGGCGCTTCCTTTTCTCTTCTTCCCCTTCCCGCTCCTCCACCTCTTTCAAGGCTGATGACCTGGGAAGGCCCCTTGTTGTAGAGGACATAAATGTGTCATGTAATCAAAACACTGAGTTGCCTAGGGATTATGACCTCGAGGGTGCTTGCTATCCAAGTGAAGGTCATTTTCGCTCACCAAGAACCCATGGGCTTGTTTATAAGCAAAGGCTTCCTGCTGTTTCTCTTTCATCTAATGTGCTTCAAGGCAATCCAGCCACCAGTGATAGTTTGGTTCTAGATATAACTTCTGATCCTTCAGAAGATGTTGGTCAAACACTTAAGCTTTCCCCAGCCAATTTTGCTGAAATTCAAAAGCATACTGGAGCAAATTTTGAAAATGCTAGACCGCGTGCCTTTGTGCAAAAAGACATATCTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCGATGGTCCTTCTCTTGGACTTCATTATTCCGTACTGTCAACAAGTCCCTCTCGCCTACCACTGACTTTGGGAAGAGTTTCTCCAAGTGATTTGTTGATAAAAGATTTAGAAGTGTCCGGAAAGCATGCACTAATAAAGTGGAATTTGGATAGAATGAAATGGGAGCTGGTAGATATGGGTAGCCTAAATGGGACACTTTTGAATTCTCAGCCAATCAACGATACAAACACTGGAAGCAGACATTGGGGTGTCCCGAGAGATCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAGAATAGTTGTCCATATTACTACACAAAATGAGCAGAACATTCCCTTTGGAGTGGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTTTACCTGGGCTGGATCAGTTTGGACTGTTTGGCATTTGCGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGATAATTACTACTATATTATCAAATTCATTAACAAGAGAGAGGGTTTTATCACTTCGTGATGCTTCAGATATTCTTCGAGGCGCATTTTCTCAGGCAGAAGCATGCATGAATCATTATTATGAGGGATGCACAGCAACAGTGCTTCTGGTGTGGGCTGATGAAAATGAAAATATTTTTGCGCAATGTGCAAATGTTGGAGACTCCAGCTGTGTCATGAGTGTTGATGGCAAGCAAATCAAGATGACAGAAGATCATAAGATAACAAGTAATTCTGAAAGGCTCAGAATTGCAGAGATGGGTGAACCATTGAAAGATGGGGAAACACGTTTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCACGGTTCAGTTCAGAGCCTTATATAAGTGAAGTGGTGCATATTGATCAAGCTAGGAGAACCTTTGCCATTCTAGCTAGCGACGGGTTATGGGATGTCATCAGCATGAAGAAGGCAAATCAGCTAGTGCTTCAGATGAAGGAGCAGCACTCCATAGATAGAGAAAATTCAGCAGAAAAGATTGCTAATTTTTTGTTGAGTGAGGCTAAAACACTGAGAACAAAGGATAATACCTCTGTTATCTTTTTAGATTTTGATAACTCCAGTAGATTCTATTGTAAAGTCGAGTCTTAG 1749 0.4197 MAMTMVESIVLLFVLLMLLLLIILIFFSFKPWRFLFSSSPSRSSTSFKADDLGRPLVVEDINVSCNQNTELPRDYDLEGACYPSEGHFRSPRTHGLVYKQRLPAVSLSSNVLQGNPATSDSLVLDITSDPSEDVGQTLKLSPANFAEIQKHTGANFENARPRAFVQKDISDQRSCLTLEVIDGPSLGLHYSVLSTSPSRLPLTLGRVSPSDLLIKDLEVSGKHALIKWNLDRMKWELVDMGSLNGTLLNSQPINDTNTGSRHWGVPRDLANGDIITLGTTSRIVVHITTQNEQNIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIITTILSNSLTRERVLSLRDASDILRGAFSQAEACMNHYYEGCTATVLLVWADENENIFAQCANVGDSSCVMSVDGKQIKMTEDHKITSNSERLRIAEMGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEVVHIDQARRTFAILASDGLWDVISMKKANQLVLQMKEQHSIDRENSAEKIANFLLSEAKTLRTKDNTSVIFLDFDNSSRFYCKVES* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1546 582 CDD FHA 176 289 IPR000253 GO:0005515
Lan4g1546 582 Gene3D - 306 578 IPR036457 -
Lan4g1546 582 PANTHER PROTEIN PHOSPHATASE 2C 34 581 IPR015655 GO:0004722|GO:0006470
Lan4g1546 582 Pfam Protein phosphatase 2C 309 563 IPR001932 -
Lan4g1546 582 ProSiteProfiles PPM-type phosphatase domain profile. 298 570 IPR001932 -
Lan4g1546 582 SMART PP2C_4 292 568 IPR001932 -
Lan4g1546 582 Pfam FHA domain 203 278 IPR000253 GO:0005515
Lan4g1546 582 ProSiteProfiles Forkhead-associated (FHA) domain profile. 202 253 IPR000253 GO:0005515
Lan4g1546 582 SMART FHA_2 201 253 IPR000253 GO:0005515
Lan4g1546 582 SUPERFAMILY SMAD/FHA domain 174 286 IPR008984 GO:0005515
Lan4g1546 582 CDD PP2Cc 310 570 IPR001932 -
Lan4g1546 582 ProSitePatterns PPM-type phosphatase domain signature. 335 343 IPR000222 GO:0043169
Lan4g1546 582 PANTHER PROTEIN PHOSPHATASE 2C 70 34 581 - -
Lan4g1546 582 SUPERFAMILY PP2C-like 286 572 IPR036457 -
Lan4g1546 582 Gene3D - 170 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1546 Lan-Chr4 24562211 24567988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1546 1 573 PP2C-type Phosphatase Gene Family AT5G19280 56.761 0.0 634