Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1536 ATGTCTCCAGAATATGCAATGCATGGACAGTTTTCTGTGAAATCAGATGTGTTTAGCTTTGGAGTCATGGTTCTAGAGATTATCAGTGGGAAGAGGAAAGGTTCTTCATCTGAATCAGAATGTGTAGAGGACATTCGAAAACATGCATGGACAAAATGGACTGAGCAAACACCACTGGAACTACTGGATCCTAATATGGTTGGATCTTATTCCGAAGAAGAAGTCATCAAATGCATTCAGATTGGTTTGTTATGTGTTCAAGATGACCCAGATGAAAGACCTACAATGGCAACTATTGTTTTCTACCTAAATAGTCCTTCTACAAACTTGCCATCCCCACATGGACCCACACATTTCAAGGGCAGTAGAAAAGATGATAACTTGACCAAAAAGAAGTTTGATAATAGTGTTTCTATCAATGGGATTACTCTTACAAAATTCTTACCTCGTTAA 453 0.3819 MSPEYAMHGQFSVKSDVFSFGVMVLEIISGKRKGSSSESECVEDIRKHAWTKWTEQTPLELLDPNMVGSYSEEEVIKCIQIGLLCVQDDPDERPTMATIVFYLNSPSTNLPSPHGPTHFKGSRKDDNLTKKKFDNSVSINGITLTKFLPR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1536 150 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1536 150 SUPERFAMILY Protein kinase-like (PK-like) 1 115 IPR011009 -
Lan4g1536 150 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Lan4g1536 150 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 150 - -
Lan4g1536 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 150 - -
Lan4g1536 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1536 Lan-Chr4 24467962 24469372 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1536 1 150 Receptor kinase-like Gene Family AT4G23140 45.860 4.49e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g1536 PK_Tyr_Ser-Thr 2.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1536 - - lang:109346446 301.982