Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1534 ATGAGTTCCTTCCATTTGTTCCTTCTACCTCTAACTTTCTTTTATCTCTATAGCCATTGTTCTTCTTCTCCCGTCATCGAAGCTGCTTTACATCAAGATCCCCAAGCTTTCTATAACTGCACAAGGAACACAACTTTTGCTCTCAATGACAATTACCATTCCAACATCCAAACACTCCTTCACAGTCTCTCCTCTAATGGCACTGGCAATCCCATAACCTACAACACTACAGTTCATAGTAAAAACACTGCAGACACTGTCTATGGCTTTGCCTTTTGTATGAGAGATGTCACCCCAAAAGAGTGCCAAGAGTGTGTGATAGAAGCAGCCAAACTCATATCATCTTCGTGTACCACAGCAAAAGAAGCCATAATTTGGTACCATGTATGCATGGTGCGATATTCTGACCGTTATTTCTTCTCCATGGTGGAAGAAAGTCCCAAACTTACCTTCATGAATGATCAAGATTATGTAGGCCAGGCTAGCCACTTCAACAATATACTGTGGGATATGATGAATGAGTTGAGAGCTATGACAGCAAGTGCTTCAAATAAATATGCTTACAAGTCAGAGAACATAAGTGAGAATGAAAAGCTATATGGTTCTGGTTGGTGTGCCCAATACCTATCCACAGAGAACTGCAGCTGGTGTCTCAGTGATGCCATTGCAGAAATTACAAAAGTTTGTTGCAGAGGAAAATCAGGAGGAAGAGTGGCATACCCAAGTTGCGGTGTTAGATTTGAATTATATGCATTCCTCAACAGCGACTTTGATTGGCTGCAGAAACCACTGCTGCCCAGTAGTACTCGCTCTTCGGCTCAACAAGGAAAACAAAAACAGAAGATATTAACAATAATTGTGATCGTGGTTCCAATTGTTGTTTCACTGGTGCTTTTATCTTTAGGTTGCAACTGTCTTCTACATAGAAGAGAAAGAAAGAAGGAAGATGATATTCTCAAAGAAAGCTTTGGGATTGATATTACCACTTTGGAGTCTTTGCGATACGACTTGGCCACAATTGAAGCTGCAACAAACAGATTTGCTACAGAAAACATGATAGGCAAAGGGGGATTTGGAGAAGTCTATAAAGGTATTCTTTCAGATGGACAAGAAATAGCTGTGAAGAGGCTTACAAGAAGCTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAAGTCCTTGTTATAGCCAAGCTTCAACACAGGAATCTAGTGAGGTTACTAGGATTTTGTTTGGAAGCTGAAGAAAAAATACTCATCTATGAGTATGTACCAAACAAGAGCCTTGATTACTTTTTATTTGATCCCGAGAAGCGGAGATTGTTAACTTGGTCTAAACGTCACATGATCATAACAGGAGTTGCTCGAGGAATTGTGTATCTACACGAGGATTCTCGCCTAAAAATAATACACCGTGATCTGAAACCCAGTAATGTTTTGTTAGATAGCAATATGAATCCCAAAATCTCAGATTTTGGTATAGCCAGAATTGTGGCCGCGGATCAAATTGAGGAAAGTACCTTCCTCTTTATCATTGTCAATTTTGCAAATAACAAAGCACATGCGTCTATTTTCATTGGCTCCAGTTGCATAGGAAACACAATAACTCCTAACAGCGCCTTATGGTTAAACCGCAAGACTCTCCTCTCTTATTTATCTTCCAACGCAACCAACAACAAAGACTACTACAACGCCACAGTTGTGGGCATAAACCACACCAATGACACACTCTATGGAAGTTTCATGTGCAGAGGTGATGTTCCTTTTCAGGTATGTGGACAATGCATTTTAAACGCAACCAACAAACTATCCTCAGATTCAGACTCATCATATTGCCCCTTGGCCAGGGAAGTGTCCATTTGGTACGATGAGTGTATGATTCGATATTCCAACCACTCTTTCTTCTCCATTGTCGACTTAAATCCACCTATATCCACATGGGAAAATGATGCCAATGCAACTGATGAGAAAAGTTTCATGCATTTATTGTATGATACCCTTAACCAAACTGCAAATGAGGCAGCCAATAATCATTCTATTGGTGTCAAGAAGTATGCGACAAAGCAAGCAAGGATATCTGGATTTCAAACCCTTTTCAGTCTTGCTCAATGCACACCGGATCTGTCACCCAAAGACTGCAGAACATGTCTGAATCTTATGATATCAAATATTAAAGAGGGTGGTATAGGTAATTCATTGTTAGCAATGATTGAGAATCTAAGTTGTAAAATTAGATATGATGTGTACCCTTTCTATCGCCCCATTATTTCTCCACCACCAAAACCAAATAGACCTCATGTTCCTGAAACCAATTCTTCCATTACAAATTCAGATCATTCACAAGGTCCTAGTTATCTTTCCCACAGTTGTTCAAGCAATCAAACCATCACCAAAAATAGTGATTTTCTATCAAATCTCAGAACTCTCCTTGCTTCATTGTCTTCCAACGCCACTATTAGGACCGGTTTCTACAAGACTACCATCTACAATAAAAAAACCTCAGACACAGTCAATGGCCTCTTCATGTGCCGTGGTGATGTTTCCCCTAGCCTTTGTCAACTATGTGTTCTAAAAGCAACCCAAAGAATATCTATAGAGTGCAGCTTCTCCAAAGAAGCTATTATTTGGTACAACCATTGCTTGCTTCGCTATTCATATCGCTCTTTCTTCTCCACTGTAGACACAAGTCCTACGTTTCAGGAGTTCAGTGTCGATAATACTTCTAACCTCAACCAACAGCAAAGCTTCTTTACTTGGTCACTAGCGAATACTTTATCACAAGTGCAGATCGATAAATGGGGGAGTAGTATAAAGAATTATGGAACAAGATCATTAAAAGTAGATGATTTACATACCCTTTATATTCTTGCACAATGTACACCTGATCTATCTATTTGGGATTGCAGTACATGTCTGCATAATATTTTCAGGTATAGCATACCATGGTGTTGTTTGGCAAGTCCAAAGGGAAAAGTTCTACATCCTAGCTGCTATTTGATGTTTGGGTTGTCACAGTTTTACGAGGTTGGTGATGAAGCTTGGGCTCTCGAACCAGTTACAACTTCTCCAGGAACCAAAGGAAAAGCCAGATTACGACTGATCAGCATAGCGATGGTTCCAATTCTATTTTTGTTGATACTTTTCTTTGCAAAACGTATCAGACGGCTTAATGAGCTAAGGCGTTATAAGGCTATTCTTAAAGAAAACTTTGGAAATGAAAGTACTACTTTGGAGTCACTGCAATTTGACTTCGCTGCAATTGAAGCGGCTACAAATAAGTTTTCAAATGATAACCTGATAGGCCAAGGAGGATTTGGAAAAGTTTACAAGGGTACTCTTCTTGATGGTCGAGAAGTAGCTGTAAAGAGACTCTCAAAAAGTTCCGGGCAAGGTGCAGCAGAATTCAAGAATGAGGTTTTACTAATAGCCAAGCTTCAACACAGAAATTTAGTGGCACTATTAGGATTTTGCTTACAAGAGGATGAGAAAATACTTGTTTATGAGTTTGTTCCAAACAAGAGCCTCGACTATTTTTTATTCAATCCTCAAAAGCAAAGGTTGTTAAGTTGGCGTGAGAGATATAAAATTATAGGAGGGATTGCTCAAGCAATTCAATATTTACATGAATATTCTCGTCTTAAAATCATACATCGAGACATCAAACCTAGTAATGTTTTACTAGATGACAAAATGATTCCAAAAATTTCAGATTTTGGAATGGCAAGAATGGTTGCTATAGACCAAGAACAAGGAAGAACAAATAGAGTTGTAGGAACATATGGTTATATGTCTCCAGAATATGCCATGCTTGGAAGGTTTTCTGAGAAATCAGATATCTTCAGCTTCGGAGTTATGGTTTTGGAGATCATCAGTGGTGAAAAACATTCTACTTCTTATCAACCATACCATGTCGATGGCCTATTGAGTCATGTTTGGAAACAATGGAGGGATGGGGCACCATTTGAAATATTGGATCCAAGTCTGCATGGATCATGTTCTCAAACTGAAGTAATGAAATGCATTCAAATTGGTCTATTATGTGTTCAAGAAATTCCTGATGATAGGCCACTAATGGCTGAAGTCGTTTCATATCTAAGTAGCCCTTCAGTTGAGTTGCCATTTCCGTGTGAGCCAGCATTTTTTATACATGGTGGAATGGAAATAAACATGGTTGAAATGGAATTAGAATTAGATGGTCTAGCTAAGAATATCACTCCATTCTCTATCAATGAAATGTCTATTAGTGAATCTCTTCCTCGATAG 4260 0.3899 MSSFHLFLLPLTFFYLYSHCSSSPVIEAALHQDPQAFYNCTRNTTFALNDNYHSNIQTLLHSLSSNGTGNPITYNTTVHSKNTADTVYGFAFCMRDVTPKECQECVIEAAKLISSSCTTAKEAIIWYHVCMVRYSDRYFFSMVEESPKLTFMNDQDYVGQASHFNNILWDMMNELRAMTASASNKYAYKSENISENEKLYGSGWCAQYLSTENCSWCLSDAIAEITKVCCRGKSGGRVAYPSCGVRFELYAFLNSDFDWLQKPLLPSSTRSSAQQGKQKQKILTIIVIVVPIVVSLVLLSLGCNCLLHRRERKKEDDILKESFGIDITTLESLRYDLATIEAATNRFATENMIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVLVIAKLQHRNLVRLLGFCLEAEEKILIYEYVPNKSLDYFLFDPEKRRLLTWSKRHMIITGVARGIVYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGIARIVAADQIEESTFLFIIVNFANNKAHASIFIGSSCIGNTITPNSALWLNRKTLLSYLSSNATNNKDYYNATVVGINHTNDTLYGSFMCRGDVPFQVCGQCILNATNKLSSDSDSSYCPLAREVSIWYDECMIRYSNHSFFSIVDLNPPISTWENDANATDEKSFMHLLYDTLNQTANEAANNHSIGVKKYATKQARISGFQTLFSLAQCTPDLSPKDCRTCLNLMISNIKEGGIGNSLLAMIENLSCKIRYDVYPFYRPIISPPPKPNRPHVPETNSSITNSDHSQGPSYLSHSCSSNQTITKNSDFLSNLRTLLASLSSNATIRTGFYKTTIYNKKTSDTVNGLFMCRGDVSPSLCQLCVLKATQRISIECSFSKEAIIWYNHCLLRYSYRSFFSTVDTSPTFQEFSVDNTSNLNQQQSFFTWSLANTLSQVQIDKWGSSIKNYGTRSLKVDDLHTLYILAQCTPDLSIWDCSTCLHNIFRYSIPWCCLASPKGKVLHPSCYLMFGLSQFYEVGDEAWALEPVTTSPGTKGKARLRLISIAMVPILFLLILFFAKRIRRLNELRRYKAILKENFGNESTTLESLQFDFAAIEAATNKFSNDNLIGQGGFGKVYKGTLLDGREVAVKRLSKSSGQGAAEFKNEVLLIAKLQHRNLVALLGFCLQEDEKILVYEFVPNKSLDYFLFNPQKQRLLSWRERYKIIGGIAQAIQYLHEYSRLKIIHRDIKPSNVLLDDKMIPKISDFGMARMVAIDQEQGRTNRVVGTYGYMSPEYAMLGRFSEKSDIFSFGVMVLEIISGEKHSTSYQPYHVDGLLSHVWKQWRDGAPFEILDPSLHGSCSQTEVMKCIQIGLLCVQEIPDDRPLMAEVVSYLSSPSVELPFPCEPAFFIHGGMEINMVEMELELDGLAKNITPFSINEMSISESLPR* 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1534 1419 Gene3D Phosphorylase Kinase; domain 1 1057 1168 - -
Lan4g1534 1419 Gene3D Phosphorylase Kinase; domain 1 309 422 - -
Lan4g1534 1419 SUPERFAMILY Protein kinase-like (PK-like) 1077 1382 IPR011009 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 650 747 IPR002902 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 532 630 IPR002902 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 789 884 IPR002902 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 910 1000 IPR002902 -
Lan4g1534 1419 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Lan4g1534 1419 MobiDBLite consensus disorder prediction 756 790 - -
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 640 750 IPR002902 -
Lan4g1534 1419 ProSiteProfiles Protein kinase domain profile. 347 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 522 633 IPR002902 -
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Lan4g1534 1419 MobiDBLite consensus disorder prediction 766 790 - -
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 897 1005 IPR002902 -
Lan4g1534 1419 Gene3D - 34 139 IPR038408 -
Lan4g1534 1419 Gene3D - 898 1005 IPR038408 -
Lan4g1534 1419 Gene3D - 642 750 IPR038408 -
Lan4g1534 1419 Gene3D - 782 888 IPR038408 -
Lan4g1534 1419 Gene3D - 521 633 IPR038408 -
Lan4g1534 1419 Gene3D - 148 252 IPR038408 -
Lan4g1534 1419 SMART serkin_6 347 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1534 1419 SMART serkin_6 1093 1364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1534 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 257 - -
Lan4g1534 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 274 506 - -
Lan4g1534 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1023 1392 - -
Lan4g1534 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 774 1012 - -
Lan4g1534 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 515 755 - -
Lan4g1534 1419 CDD STKc_IRAK 1099 1364 - -
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 783 888 IPR002902 -
Lan4g1534 1419 ProSiteProfiles Protein kinase domain profile. 1093 1369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1534 1419 SUPERFAMILY Protein kinase-like (PK-like) 329 502 IPR011009 -
Lan4g1534 1419 Pfam Protein tyrosine and serine/threonine kinase 1096 1363 IPR001245 GO:0004672|GO:0006468
Lan4g1534 1419 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Lan4g1534 1419 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 515 755 - -
Lan4g1534 1419 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 774 1012 - -
Lan4g1534 1419 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 25 257 - -
Lan4g1534 1419 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 274 506 - -
Lan4g1534 1419 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1023 1392 - -
Lan4g1534 1419 Pfam Protein kinase domain 349 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1534 1419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lan4g1534 1419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1214 1226 IPR008271 GO:0004672|GO:0006468
Lan4g1534 1419 Gene3D Transferase(Phosphotransferase) domain 1 1169 1370 - -
Lan4g1534 1419 Gene3D Transferase(Phosphotransferase) domain 1 423 518 - -
Lan4g1534 1419 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Lan4g1534 1419 ProSitePatterns Protein kinases ATP-binding region signature. 1099 1121 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1534 Lan-Chr4 24461244 24471754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1534 505 755 Receptor kinase-like Gene Family AT4G05200 31.496 1.47e-31 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g1534 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1534 - - lang:109346434 2808.09