Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1533 ATGATTCCAAAAATTTCAGATTTTGGAATGGCAAGAATGGTTGCTATAGACCAAGAACAAGGAAGAACAAATAGAGTTGTAGGAACATATGGTTATATGTCTCCAGAATATGCCATGCTTGGAAGGTTTTCTGAGAAATCAGATATCTTCAGCTTCGGAGTTATGGTTTTGGAGATCATCAGTGGTGAAAAACATTCTACTTCTTATCAACCATACCATGTCGATGGCCTATTGAGTCATGTTTGGAAACAATGGAGGGATGGGGCACCATTTGAAATATTGGATCCAAGTCTGCATGGATCATGTTCTCAAACTGAAGTAATGAAATGCATTCAAATTGGTCTATTATGTGTTCAAGAAATTCCTGATGATAGGCCACTAATGGCTGAAGTCGTTTCATATCTAAGTAGCCCTTCAGTTGAGTTGCCATTTCCGTGTGAGCCAGCATTTTTTATACATGGTGGAATGGAAATAAACATGGTTGAAATGGAATTAGAATTAGATGGTCTAGCTAAGAATATCACTCCATTCTCTATCAATGAAATGTCTATTAGTGAATCTCTTCCTCGATAG 573 0.3735 MIPKISDFGMARMVAIDQEQGRTNRVVGTYGYMSPEYAMLGRFSEKSDIFSFGVMVLEIISGEKHSTSYQPYHVDGLLSHVWKQWRDGAPFEILDPSLHGSCSQTEVMKCIQIGLLCVQEIPDDRPLMAEVVSYLSSPSVELPFPCEPAFFIHGGMEINMVEMELELDGLAKNITPFSINEMSISESLPR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1533 190 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1533 190 SUPERFAMILY Protein kinase-like (PK-like) 2 153 IPR011009 -
Lan4g1533 190 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Lan4g1533 190 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Lan4g1533 190 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 165 - -
Lan4g1533 190 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1533 Lan-Chr4 24460108 24461233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1533 1 190 Receptor kinase-like Gene Family AT4G23150 46.316 1.65e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g1533 PK_Tyr_Ser-Thr 3.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1533 - - lang:109346444 388.652