Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1532 ATGATTTCTGATATCACCAAAACAAGACTAGTAACTATCATAATCAGCACCCTTATGCTCACAACCTCAGCTTCTATATTCAACAACGTAACCTGCATAAGCAACAAAACTTTCACTCCAAACAGCACCTTCCATCTCAACCTCAACACCCTTCTCTCTACCCTTTCCTCAAAACTCCTAAGTGGCAACAACATTAGATTCTTCAAAACATTCTCAGGTGAAAATGATCATTCAAACACTGTCTATGGCCTCTTCATGTGCCGTGGAGACGTGCCATTCCCATTATGCAAAGAATGTGTTGGTTTCGCAACACAAACCATAGCATCAACTTGTATAGCTTCAAAAGAAGCTATTATTTGGTACAATGAATGTTTATTGCGATATTCTTATAGATTTTTCTTTTCAATTATGGAAGAATGGCCTAGGCACCAGATAAAGATACCACTAGGGGACCCTTTGTTATTGCAGAGTAATGAATTCTACACTGCTTTAGGATCTATTTTCAGTGAACTTGCAAATGAAGCAGCACTTTCTCTTCAAGGATCTTCTTCTGAACAATTTGCTGTGAAGCAAGCCAATGCCTCTGCTACCACAACCCTATATGGTCTTGCTCAGTGCACACCAGACTTGTCTATCACCAACTGCAGGCGGTGTGTAACGGATGCTGCCGCGGAATTTTCGAAGTCTTGTTGCGGAGGTAGCATAGGGGAAAGTGTTTTGTTTCCTAGTTGCATTGTTAGGTATGAAACATATCCATTCTATCAGCATTCAGGAACATCACTGCCAACAATTATCAATGGAGGAAGAAATAAAACAAAAGTGATTGAGATCATTGTTATCTTGGGTGCCTTTTTGGTGATTCTTTTTGGCATTGGCCACTATTTCTTGCGGATAAAAGCGAGAAAGAGGCATAAGCGCAAGGCCATTCCCAGAGAAAACTCTGGGCCTGAGATTGAAATTTGTAGTGTGGAGTCCTTGGAATTTGATTTAGCTACAATTGAAGTAGCAACAAACAAGTTTTCTGATGAGAGGAGGATAGGCAAAGGAGGATACGGACAAGTCTACAAGGGAATTCTTCGGGACGGCGAAGAGATAGCAGTGAAGAGACTCTCAAAAAAATCAGGACAAGGAGGGGAGGAATACAAAAATGAAGTGTTGTTAATAGCTAAACTTCAACACAGAAATTTGGTGAGATTAATAGGATTTTGCCATGAACAACATGAGAAAATACTTATCTACGAATATGTTCCCAACAAGAGTCTTGATCACTTCCTATTTGATTCCTTGAAGGAAAGACAATTAACTTGGCCTGAGAGATATAAAATCATAAAGGGAATTGCTCGAGGAATCCTTTATTTGCATGAAGATTCTCGCCTCATGATTATACACCGCGATCTCAAACCAAGCAATGTGTTGATAGATAGTGACATGAATCCGAAAATCTCTGATTTTGGCATGGCCAGGATGGTAGCAATCGACCAAATCCAAGGAGCTACCAATAGAGTTGTTGGCACATTTGGATATATGTCTCCAGAATATGCAATGCATGGACAATTTTCAGTGAAGTCTGATGTTTTCAGTTTTGGAGTCATGGTTCTTGAGATAATAAGTGGAAAGAAGAATTCTTGTTCTTTTGATTCACGTCGTGTTGATGACCTCTTAAGTTATGCTTGGAACAAATGGAAGGATGAATTGCTATTAGACTTGTTGGACCCAATTTTGCAAGAATCTTACACTCAAAATGAAGTAGAAAGGTGTGTCCAGATTGGTTTATTGTGTGTTCAAGAGCATCCAGATGATAGGCCAACAATGGGAATGGTTGCTTCATATCTAAACAATGTTTCAGTTGAAATGCCAAATCCTGTTGAACCAGCATTTTTCATGTATGGTAGAAGAAGAAGAAGAGATGGAGTTGAACATGAATCATCTTCAGAATTTACACTAAAAAGATATTGGAAGGAATTGTTGGGCTGA 1974 0.3921 MISDITKTRLVTIIISTLMLTTSASIFNNVTCISNKTFTPNSTFHLNLNTLLSTLSSKLLSGNNIRFFKTFSGENDHSNTVYGLFMCRGDVPFPLCKECVGFATQTIASTCIASKEAIIWYNECLLRYSYRFFFSIMEEWPRHQIKIPLGDPLLLQSNEFYTALGSIFSELANEAALSLQGSSSEQFAVKQANASATTTLYGLAQCTPDLSITNCRRCVTDAAAEFSKSCCGGSIGESVLFPSCIVRYETYPFYQHSGTSLPTIINGGRNKTKVIEIIVILGAFLVILFGIGHYFLRIKARKRHKRKAIPRENSGPEIEICSVESLEFDLATIEVATNKFSDERRIGKGGYGQVYKGILRDGEEIAVKRLSKKSGQGGEEYKNEVLLIAKLQHRNLVRLIGFCHEQHEKILIYEYVPNKSLDHFLFDSLKERQLTWPERYKIIKGIARGILYLHEDSRLMIIHRDLKPSNVLIDSDMNPKISDFGMARMVAIDQIQGATNRVVGTFGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSCSFDSRRVDDLLSYAWNKWKDELLLDLLDPILQESYTQNEVERCVQIGLLCVQEHPDDRPTMGMVASYLNNVSVEMPNPVEPAFFMYGRRRRRDGVEHESSSEFTLKRYWKELLG* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1532 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Lan4g1532 657 Gene3D Transferase(Phosphotransferase) domain 1 416 621 - -
Lan4g1532 657 Gene3D - 154 253 IPR038408 -
Lan4g1532 657 Gene3D - 25 133 IPR038408 -
Lan4g1532 657 Pfam Protein kinase domain 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1532 657 Gene3D Phosphorylase Kinase; domain 1 300 415 - -
Lan4g1532 657 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 635 - -
Lan4g1532 657 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1532 657 ProSiteProfiles Gnk2-homologous domain profile. 142 253 IPR002902 -
Lan4g1532 657 ProSiteProfiles Protein kinase domain profile. 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1532 657 CDD STKc_IRAK 346 613 - -
Lan4g1532 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 635 - -
Lan4g1532 657 Pfam Salt stress response/antifungal 32 129 IPR002902 -
Lan4g1532 657 Pfam Salt stress response/antifungal 158 251 IPR002902 -
Lan4g1532 657 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Lan4g1532 657 ProSiteProfiles Gnk2-homologous domain profile. 26 133 IPR002902 -
Lan4g1532 657 SUPERFAMILY Protein kinase-like (PK-like) 326 633 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1532 Lan-Chr4 24453719 24458315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1532 32 645 Receptor kinase-like Gene Family AT4G05200 44.006 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g1532 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1532 - - gmx:100791642 910.983