Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1523 ATGCAGAACGACGAAGGACAAATCACTGAGCTATATATCCCTAGGAAGTGCTCTGCTACAAATAGATTGATAACTTCCAAAGATCATGCCTCTGTCCAAATTAACATTGGCCATTTGGATGAGAGTGGTGTTTACAATGGAAATTTCACCACAGTTGCCCTATCTGGATTCGTTCGTGCACAGGGTGATGCCGACAGTTCGGTAGATCGTCTGTGGACAAAGAAGAAGGTTGAAGTTAAGCAACAGTAG 249 0.4337 MQNDEGQITELYIPRKCSATNRLITSKDHASVQINIGHLDESGVYNGNFTTVALSGFVRAQGDADSSVDRLWTKKKVEVKQQ* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1523 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lan4g1523 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lan4g1523 82 Gene3D - 1 81 IPR038579 -
Lan4g1523 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Lan4g1523 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 - -
Lan4g1523 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1523 Lan-Chr4 24357686 24358988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1523 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 83.951 2.66e-49 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1523 K02971 - gmx:100817753 149.828