Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1522 ATGTCTATGTTACTGGACCACTCCGCCGCCGCTAGCTTATTATACGGTGGAGACTCCGACGAAATATTTTCTGACCACCTCTCTCCGCCACTAGATGAGGCAACCATCACTTCACTCATCGAGACAGAGACCGATCACATGCCGGAAAAAGACTATCTCCATCGCTGTCGGCAACGATTAGTGAACATGACGGCACGGTTAGACGCCGTTAACTGGATCTTAAAGGTTCACGCTTATTATCAATTCCGTCCAGTAACGGCGTTTCTATGTATCAATTACTTGGACCGTTTTCTCTCTCGTACTTCTCTTCCGAGAGAAAATGGGTGGGTGTTTCAGCTAGTATCAGTGGCGTGTTTGTCTGTAGCGGCGAAAATGGAGGAGCTTGAAGTGCCGTTATTAATGGACCTGCAATTATTTGAACCCAGATTCATATTCCAACCCAAAACGATTCAGAGAATGGAGCTATGGGTGATGAGTAATCTTAATTGGAGACTGCATTCTGTAACGCCATTCGATTATCTTCATTACTTCATCACCAACCTACCTTCTTCTTCTTCTTCTTCATCAGAAACACAAGTACAAGTATTGAATCGGTTATTCTTCACAGCCTCTGATCTTATAATCTCCACAACTCGTGTGATCGAGTTTTTGGGGTTTGCGCCGTCAACCATAGCAGCCGCCGCAGTGATTTGTTCAACTGCCATTGTTTTGGGCGACGCGCCTTTGCACCTCTCTTTTCACCATAGACTAAACAAAGAAATGGTGAAATGCTGTCAAAAACTAATGGAGGAGCACGTGGTAGACACGTGTCCTCATAAAGACAACAGAGCCGACGTGGCTAGCCCCGTTGGCGTATTGGATGCCCCAATTTGTAGCAGTTGTGACATGTCTTCCGACATTAACAACCATGTCTCAGCCATCGACCAATTTGAAGAAACTGAGTCACTAATCAAAAGGCTGCAATCCTATGCATTTGATGTATAG 984 0.4512 MSMLLDHSAAASLLYGGDSDEIFSDHLSPPLDEATITSLIETETDHMPEKDYLHRCRQRLVNMTARLDAVNWILKVHAYYQFRPVTAFLCINYLDRFLSRTSLPRENGWVFQLVSVACLSVAAKMEELEVPLLMDLQLFEPRFIFQPKTIQRMELWVMSNLNWRLHSVTPFDYLHYFITNLPSSSSSSSETQVQVLNRLFFTASDLIISTTRVIEFLGFAPSTIAAAAVICSTAIVLGDAPLHLSFHHRLNKEMVKCCQKLMEEHVVDTCPHKDNRADVASPVGVLDAPICSSCDMSSDINNHVSAIDQFEETESLIKRLQSYAFDV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1522 327 Pfam Cyclin, N-terminal domain 36 165 IPR006671 -
Lan4g1522 327 Pfam Cyclin, C-terminal domain 168 269 IPR004367 -
Lan4g1522 327 SMART cyclin_7 71 159 IPR013763 -
Lan4g1522 327 SUPERFAMILY Cyclin-like 29 166 IPR036915 -
Lan4g1522 327 SMART Cyclin_C_2 168 294 IPR004367 -
Lan4g1522 327 PANTHER CYCLIN-D2-1-LIKE 19 303 - -
Lan4g1522 327 PANTHER CYCLINS 19 303 IPR039361 -
Lan4g1522 327 ProSitePatterns Cyclins signature. 66 97 IPR006671 -
Lan4g1522 327 CDD CYCLIN 66 155 IPR013763 -
Lan4g1522 327 Gene3D - 37 259 - -
Lan4g1522 327 Gene3D - 49 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1522 Lan-Chr4 24352741 24354877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1522 12 297 Core Cell Cycle Gene Families AT1G70210 36.986 7.77e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1522 K18810 - gmx:100776178 369.007