Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1502 ATGGTTGATTCATTAAATGAAGCCCAACGCCGGGGTAATGCTCTAGCTGTTTCTCCTAAGAGGGACAGTGCTATGTTTGAAGGGGACAGAGACTTTGAGCCGCATAATGGAATTGAATTTGAATCTCATGAAGCAGCCTATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGCTCAAAGAAAACAAAGGAATTTATTGATGCCAAATTTGCATGCTCTAGGTATGGAGTTACACCTGAGTCTGACAGTGGGACCAGTCGAAGACCAACTGTAAAGAAGACAGATTGCAAGGCCTGCATGCATGTGAAGAGAAGGCCGGATGGGAATTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAGAAGAATAATATTGACATTTTGCATGCCGTTAGTGAACGCACCAGAAAGATGTATGTTGATATGTCTAGGCAGTCTGGTGGTTCTCAACACATTGGGTCTCTCTTGGATGACATAAACTATCAGTTCGATAGAGGCCAGTATTTGGCTTTGGATGAGGGAGATGCCCAAGTTATGCTTGAATATTTCAAGCGTATTCAAAAGGATAATCCCAACTTCTTCTATGCTATAGATTTAAATGAAGAGCAACGGTTAAGAAATCTATTTTGGGTTGATGCAAAGAGTAGAAGTGACTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACATAAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTGTTGGAGTGAACCATCACTCTCAACCTATATTGCTTGGATGTGCATTGGTTGCGGATGAGACTAAATCGACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCGATGGGTGGTCAAGCTCCCAAAATTGTAATCAGTGATCAGGACAATGCTTTGAAGACTGCAATTGAAGAAGTCTTCCCAAACGTTCGACATTGCTTTTCTCTCTGGCACGTGCTGGAAAAGATACCTGAAAATCTGTCTTTTGTGATCAAACAGTATAAGAACTTCTTGCCAAAGTTTAACAAGTGCATTTTCAAGTCATGGACAGATGAACAATTCGACATGAGATGGTGGAAAATGGTCACTAGATTTGAGCTCCAATATGATGTGTGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCAACATATATGGGGGATGCATTTTTAGCTGGAATGTCTACACATCAACGCTCTGAAAGTATGAACTCTTTCTTTGACAAATATATTCATAAGAAAATCACCCTTAAAGAGTTTGTAAAACAATATGGGATAATTCTTCAGAATAGGTATGAAGAGGAAGCCATTGCAGATTTTGATACTTTGCACAAACAACCAGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAGTTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATACAGGCTGGAGATGGAACTATCGCAAAATTTATAGTTCAAGATTATGAAAAGGATGAAGAGTTTTTGGTAACTTGGAGTGAGATGAGCTCAGAGGTCTCTTGCTTCTGTCGAATGTTTGAATATAAAGGCTTCCTTTGCAGGCACGCATTGAGTGTTCTCCAACGTTGTGGCTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGGTGGACCAAAGATGCTAAAAATAGCCAATCCTTGGCAGATAGGACTCGTAGGATTCAAACTCGGGTGCAACGTTATAATGACTTGTGTAAACAAGCTATTGATTTGAGTGAAGAAGGATCGTTATCTGAAGAGAGCTATAATGTTGTTTTTCGTGCACTTGTTGATGCCCTGAAGAACTGCGTACTTGTGAATAATTCTAATCACAATGGTGCAGAAACTAGCAACAATTCTTACAGCTTTCGTGAATCAGAAGAAAATCAGGGTATCCTTGCTTTGAAACCAAGTAAGAAGAAGACCACAGCTAGGAAAAGAAAGGTGCAATTAGAGCAGGATGTTATACTTCTTGATGCGCAAGATAGCCTGCAGCAAATGGATAACCTTAGCTCAGATGCAATAACTCTTAATGGATATTACGGTGCCCAGCAAAATGTGCAAGGACTGCAGGTACAGTTGAACTTAATGGAGCCACCTCATGATAGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCACTGAATTCTATGGCTCCAAGCCATGATGGGTTTTTTCGAACACAGCAAAACATTCATGGGCTGGGAGGGCAATTGGAATTTCGTCCAACAACTACTTTTGGATATAGCCTTCAGGATGAGCCAGAACCTCAGTTTCATGGCAACAGTTCAAGAAATTAG 2427 0.396 MVDSLNEAQRRGNALAVSPKRDSAMFEGDRDFEPHNGIEFESHEAAYLFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGTSRRPTVKKTDCKACMHVKRRPDGNWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVDMSRQSGGSQHIGSLLDDINYQFDRGQYLALDEGDAQVMLEYFKRIQKDNPNFFYAIDLNEEQRLRNLFWVDAKSRSDYLSFNDVVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALVADETKSTFVWLMKTWLRAMGGQAPKIVISDQDNALKTAIEEVFPNVRHCFSLWHVLEKIPENLSFVIKQYKNFLPKFNKCIFKSWTDEQFDMRWWKMVTRFELQYDVWFQSLYEDRKKWVPTYMGDAFLAGMSTHQRSESMNSFFDKYIHKKITLKEFVKQYGIILQNRYEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRIQAGDGTIAKFIVQDYEKDEEFLVTWSEMSSEVSCFCRMFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKNSQSLADRTRRIQTRVQRYNDLCKQAIDLSEEGSLSEESYNVVFRALVDALKNCVLVNNSNHNGAETSNNSYSFRESEENQGILALKPSKKKTTARKRKVQLEQDVILLDAQDSLQQMDNLSSDAITLNGYYGAQQNVQGLQVQLNLMEPPHDSYYVNQQSMQGLGPLNSMAPSHDGFFRTQQNIHGLGGQLEFRPTTTFGYSLQDEPEPQFHGNSSRN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1502 808 Pfam MULE transposase domain 255 348 IPR018289 -
Lan4g1502 808 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
Lan4g1502 808 SMART 26again6 546 573 IPR006564 GO:0008270
Lan4g1502 808 MobiDBLite consensus disorder prediction 1 20 - -
Lan4g1502 808 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 724 IPR031052 GO:0006355
Lan4g1502 808 Pfam SWIM zinc finger 545 570 IPR007527 GO:0008270
Lan4g1502 808 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Lan4g1502 808 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 13 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1502 Lan-Chr4 24162032 24166877 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan4g1502 MULE 4.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1502 - - lang:109346405 1642.48