Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1501 ATGCTGCGTTTGTTCTACAGCCCTCTTCGTCGGTGTTTCCCACTCGGCGGCGGCGGCAGCGGCGGCGGAGGCGGAGGCGACGACAGACTTCTGTGGCACACTGAATTGAAGCCTCATGCCTCCGGTAACTTCTCCATCGCCGTCGCTCAAGCCAATTACAGTCTCGAAGATCAGAGCCAAGTGTTTACCTCTCCCTCCGCCACCTATATCGGCGTTTACGACGGTCATGGTGGACCTGAAGCTTCTAGATTCGTCAGCAGGCATCTCTTTTCTTATTTGAACAAATTTTCCACTGAACAAGGGGGATTGTCGGTGGATGTGATTAAAAAAGCAATTCGTGCCACAGAGGAAGATTTCTGTAGTTTGGTGAAGCTGTCAATGCACATTAGTCCCCAAATTGCTTCTGTAGGATCATGTTGTCTTCTTGGTGCAATTGCTGATAATGTGTTGTATGTTGCCAACCTTGGAGACTCTAGAGTTGTTCTCGGTAGGAAGTATACTGGGAGCAAGATTTCTTCGGTAGTGGCAGAACGGTTGTCAACTGATCATAATGTAGCTGATGAAGAGGTGAGAAGAGAAGTTGAAGCCCTCCATCCTGATGATTCAGGTGTTGTGGTATATACCCGTGGAGTTTGGAGGATTAAGGGTATTATACAGGTGTCAAGATCTATTGGCGATGTGTATTTGAAGAGACCTGATATCTATACAGACCCAGATTTTAAGCAATATTTAAATCATATTCCTTTGAAGTATCCTGTAATGTCATCTGAACCATCAATCATTATCAGGGAGCTAGAGCCAGAAGATTTATTCTTGATATTTGCATCTGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGCTGATATTGTTTTCAAATATCCTAGAGCTGGAATTGCCAAGAGACTAGTTAGAACTGCCCTTCAGCAAGCTGCTAAGAAGAGAGAGATGAGATATGAGGATATAATTAAAGTCGGCAAAGGAATAAGACGACACTTCCATGATGATATCACTGTTATTGTAATCTTTCTTGATCACCAAAGAGGGTCCTCTCATGGTAGAATTAAGCAAACTGTTGGCTGTACCACCGCACCTGCTGATATTTTCTCCCTTAATGCCGACGATGCAGAAGCAGAGAAGATTTTGCTTCGTTCAATTGGATGA 1167 0.443 MLRLFYSPLRRCFPLGGGGSGGGGGGDDRLLWHTELKPHASGNFSIAVAQANYSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVSRHLFSYLNKFSTEQGGLSVDVIKKAIRATEEDFCSLVKLSMHISPQIASVGSCCLLGAIADNVLYVANLGDSRVVLGRKYTGSKISSVVAERLSTDHNVADEEVRREVEALHPDDSGVVVYTRGVWRIKGIIQVSRSIGDVYLKRPDIYTDPDFKQYLNHIPLKYPVMSSEPSIIIRELEPEDLFLIFASDGLWEQLSDEAAADIVFKYPRAGIAKRLVRTALQQAAKKREMRYEDIIKVGKGIRRHFHDDITVIVIFLDHQRGSSHGRIKQTVGCTTAPADIFSLNADDAEAEKILLRSIG* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1501 388 CDD PP2Cc 56 345 IPR001932 -
Lan4g1501 388 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Lan4g1501 388 Gene3D - 33 353 IPR036457 -
Lan4g1501 388 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 6 380 - -
Lan4g1501 388 PANTHER ALPHABET, ISOFORM E-RELATED 6 380 - -
Lan4g1501 388 SUPERFAMILY PP2C-like 51 346 IPR036457 -
Lan4g1501 388 ProSiteProfiles PPM-type phosphatase domain profile. 43 345 IPR001932 -
Lan4g1501 388 SMART PP2C_4 37 343 IPR001932 -
Lan4g1501 388 Pfam Protein phosphatase 2C 64 314 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1501 Lan-Chr4 24153147 24155842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1501 25 352 PP2C-type Phosphatase Gene Family AT3G51370 55.060 6.21e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1501 - K01102 lang:109346406 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0522 8 7473338 7475918 Lan4g1501 4 24153147 24155842 LSH
Lan20g0399 20 2774307 2777060 Lan4g1501 4 24153147 24155842 LSH
Lan6g0251 6 1880039 1882276 Lan4g1501 4 24153147 24155842 PCT