Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1498 ATGATCAAGAAATATGAAAAAACTGCTATCACAGCCATGGAACAACCAAGTGAAGTGATAACCGGAGACAAGAACAATGATGGAAGCGAAGATGACAACCAAGAAGAGTGGTTAAACTTAAACCTGAGCTTAGTCGGCACTTCATTCTCAACAGCAAGAGATACTGATTCACAAACAACACCAGCTACAACCAAACTTTTCTCATGCAACTTCTGCATGAGGAAATTCTTTAGTTCACAAGCATTAGGGGGTCATCAAAATGCCCACAAAAGAGAGAGAGGTGCTTTCAAAAGATATCAGACTCAGAGGACTATGTCAATGATGGGTTTTTCCATGAACAATCATATGTTTCGATCACTCGGTGTCCAGACCCATGCACTCTTGCACAAACCATGCAGAAGTGGTGGAACTATGAGGGCACCAAGCTTTCATGATGCATATGCAATGGAATGTAGACCTTTTGTGCCTGTGGAACAAACTGATACGGAGTGGCCAGGTAGCTTTAGATTAGTTCCACAACAACCTGAGTCACCACAGGAGTCACTCAAGCTTGATTTAAACCTCAGACTTTGA 573 0.4223 MIKKYEKTAITAMEQPSEVITGDKNNDGSEDDNQEEWLNLNLSLVGTSFSTARDTDSQTTPATTKLFSCNFCMRKFFSSQALGGHQNAHKRERGAFKRYQTQRTMSMMGFSMNNHMFRSLGVQTHALLHKPCRSGGTMRAPSFHDAYAMECRPFVPVEQTDTEWPGSFRLVPQQPESPQESLKLDLNLRL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1498 190 SUPERFAMILY beta-beta-alpha zinc fingers 64 93 IPR036236 -
Lan4g1498 190 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 190 - -
Lan4g1498 190 Gene3D Classic Zinc Finger 46 117 - -
Lan4g1498 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Lan4g1498 190 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Lan4g1498 190 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 190 - -
Lan4g1498 190 MobiDBLite consensus disorder prediction 14 33 - -
Lan4g1498 190 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1498 Lan-Chr4 24107620 24108824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1498 54 187 C2H2 Transcription Factor Family AT1G24625 39.860 1.27e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1498 - - gmx:100306296 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0514 8 7423806 7425315 Lan4g1498 4 24107620 24108824 LSH
Lan20g0408 20 2838697 2840200 Lan4g1498 4 24107620 24108824 LSH