Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1495 ATGGAGGCCAACCAGGAATTTGAAGTGGACCATCATCTGAACACAACAACAACAACAACCACTGGGACCAGTTTCTCTCAGTTACTGTTGGGAAATGATGATAATAATGAAGATGAAAATGCATTGGGTGTTGATGTGGACCAAAACTACTACTTCAACAACAACAACAACAACAACAACAACCTTACCGATTATTCTCCTGTTTTCCCTATTCACATTGCACCGCAAATGTTATGTTTTGGCAACTATGAAAGTGAAGGGCTTCCTCAAACCAATGCATTAACCTCTCAAAAATCTGTCATCACTAATTCCAGTGATTCTTCATCTGCTTCTTCTTGCAATCACACCACCACCACTACCAATTCATTGTCTAAGCCCAATTTGAAAAGTTTGCAGAAAAAACGACAAGAACCTGCTACCAAGGTAGGTGTTGGAAGCCAGAGACCACCTAAGAAGACCAAAACGGATACCCCCACTTCAACGGGACATGCAAAGAGAAAGGAAAAACTTGGAGAACGAATTGCTGCATTGCAACAACTTGTTTCTCCCTTTGGCAAGACAGATACAGCTTCAGTGCTTCACGAGGCCATGGGGTACATCAAATTTCTACAAGATCAAGTTCAAGTCCTATGCTCCCCTTACCTGCAACGCTTGCCTTCTAATGGCCATCAAATTGGGAACGGAGATAACGATGGAGAGGAGGAAGTAACGAAGGATATGAGGAGCATGGGTTTGTGTCTTATCCCTATGGAATGCACAGTACATGTGGCTAGTAGCAATGGTGCTGATTTCTGGTCACCTTCTGCAATATGGAACAATATTTCACCATCAACAACTATGCAGTGA 846 0.4255 MEANQEFEVDHHLNTTTTTTTGTSFSQLLLGNDDNNEDENALGVDVDQNYYFNNNNNNNNNLTDYSPVFPIHIAPQMLCFGNYESEGLPQTNALTSQKSVITNSSDSSSASSCNHTTTTTNSLSKPNLKSLQKKRQEPATKVGVGSQRPPKKTKTDTPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIKFLQDQVQVLCSPYLQRLPSNGHQIGNGDNDGEEEVTKDMRSMGLCLIPMECTVHVASSNGADFWSPSAIWNNISPSTTMQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1495 281 MobiDBLite consensus disorder prediction 1 24 - -
Lan4g1495 281 CDD bHLH_AtbHLH_like 165 210 IPR045239 -
Lan4g1495 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 215 IPR036638 GO:0046983
Lan4g1495 281 MobiDBLite consensus disorder prediction 99 129 - -
Lan4g1495 281 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 75 260 - -
Lan4g1495 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Lan4g1495 281 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 260 - -
Lan4g1495 281 Gene3D - 164 219 IPR036638 GO:0046983
Lan4g1495 281 MobiDBLite consensus disorder prediction 10 24 - -
Lan4g1495 281 MobiDBLite consensus disorder prediction 99 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1495 Lan-Chr4 24077577 24079736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1495 165 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.615 8.49e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1495 - - gmx:100809107 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0511 8 7404614 7406610 Lan4g1495 4 24077577 24079736 LSH
Lan20g0410 20 2851262 2853455 Lan4g1495 4 24077577 24079736 LSH