Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1481 ATGGATAACTCTTATTCTTCTTCTTCTCCTCAACTATCTGATTCTGCGCCGCCACAGATCTATTCCCGAAAGGACAAGTCTCTTGGATTGCTTTGTTCCAACTTCTTCAAGTTGTTCAATCGCGAAGGAACTGGGATGATTGGACTCGACGTAGCTGCTAACAAACTAGGGGTTCAGCGTCGCCGTATGTATGATGTAGTCAACATTTTGGAGAGTGTTGGGATTGTAGCAAGAAGAGCAAAGAATCAATATTCGTGGAAAGGTTTTAAAGAGATTCCTCGGGCTTTAAAAGAGCTTATGGAAGAGGGTCTAAGAGAAAAATCACATGCCACTTACTTACATTCAACTAGAGCTTTGAATGAGAAAGAAAATGGGAGGTCTGAAACTGATATCGAAAATAATCCGTTGGAATCATCCAAAACTGATTGCAGAAGAGACAAATCACTAGCACTTCTGACAGAGAATTTTATAAAGCTTTTCCTCTGCTCGGACGTGGAATATGTTTTGCTTGAAGATGCTGCAAAGGAAATGTTAGGCGATTCCCAGAACTCAACTGCCTTAACAACAAAAACTAGACGTCTATACGATATTGCCAATGTCCTTTCCTGCCTCAATCTGATTAAGAAGACTAACCATCCTGAGAACAGGAAAACAGCATATCGGTGGTTGGGATGCAAAGCCATTACAGGGTCAGAAGGTTCTTTGGATCAAAATGCTTCCGAGAGAATTTTTGGAGCTGAAATTACAAATTATAGTTTAAAGAGGAATAACCCAGATTCTTTAATGGATCCTCGGTTGCAAAAGAAGGCACGCATGTATCATAAGCCAGGTGATTTAGAAAATGGATACAATGATAACATCTTGGAGCACCCACCCAGAAACCGTTCAAAGGCCATAGACTTTGGTCCTTTTGCCCCCAACAAAATTTTAGAGCATATAAACAAATCAAGTTCAGGGCTTGAAGACAAGGAGCTATGA 978 0.4059 MDNSYSSSSPQLSDSAPPQIYSRKDKSLGLLCSNFFKLFNREGTGMIGLDVAANKLGVQRRRMYDVVNILESVGIVARRAKNQYSWKGFKEIPRALKELMEEGLREKSHATYLHSTRALNEKENGRSETDIENNPLESSKTDCRRDKSLALLTENFIKLFLCSDVEYVLLEDAAKEMLGDSQNSTALTTKTRRLYDIANVLSCLNLIKKTNHPENRKTAYRWLGCKAITGSEGSLDQNASERIFGAEITNYSLKRNNPDSLMDPRLQKKARMYHKPGDLENGYNDNILEHPPRNRSKAIDFGPFAPNKILEHINKSSSGLEDKEL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1481 325 MobiDBLite consensus disorder prediction 119 139 - -
Lan4g1481 325 PANTHER TRANSCRIPTION FACTOR E2F 8 313 IPR015633 GO:0000978|GO:0006357
Lan4g1481 325 MobiDBLite consensus disorder prediction 275 301 - -
Lan4g1481 325 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 8 313 - -
Lan4g1481 325 SUPERFAMILY "Winged helix" DNA-binding domain 146 225 IPR036390 -
Lan4g1481 325 MobiDBLite consensus disorder prediction 118 139 - -
Lan4g1481 325 Pfam E2F/DP family winged-helix DNA-binding domain 146 224 IPR003316 GO:0005667|GO:0006355
Lan4g1481 325 Pfam E2F/DP family winged-helix DNA-binding domain 24 88 IPR003316 GO:0005667|GO:0006355
Lan4g1481 325 SUPERFAMILY "Winged helix" DNA-binding domain 22 86 IPR036390 -
Lan4g1481 325 Gene3D - 17 90 IPR036388 -
Lan4g1481 325 Gene3D - 138 226 IPR036388 -
Lan4g1481 325 SMART E2F_TDP_2 23 88 IPR003316 GO:0005667|GO:0006355
Lan4g1481 325 SMART E2F_TDP_2 144 224 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1481 Lan-Chr4 23924618 23927729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1481 11 306 E2F-DP Transcription Factor Family AT3G01330 48.675 8.06e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lan4g1481 E2F_TDP 7.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1481 - K09391 lang:109346387 643.269