Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1453 ATGGCTTCAGTTTATGTATTCCACTTCCTTTTGTTTTCTCACCTTATGCTACTTCTCTCAGCTTCTGAAAATGAACATGGAAACAAAGTAGAGTGTCCACCTTCATTTCACTGTGGACATCTTGGCAATATCACCTTCCCTTTCACTGTAACAGAAAGCCCTCACTGTGGCTTATTTGTCATAAGCAACTGTGATAATATTAATCCATCGAAGCCCAAAAATATTCAACTGGAGAATAATGGGAAATTGTTTTGGGTTATAAGGCTTATTCACAATCCTCCTACTTCTGCTAATATTACTATTCAAATTAGAGACTACAGTTTCTATAATCTGCTGGAATCCAAAAGTTGTGAAGCCTTTAGCAATAATTATACTCTTCCAACAAAATTTCCTTTTGGTTCTATTAGTATAAGTTACAGTCAAACAATGTTCAAGTGCAATCGCTCCCTCCATGTCAAGCCTCCAAAAGATGTGCATAGTTATACAAACTGTTCTGACTACGATCTCTACTACAAGCCTTCGCTTAATCGAAATGATAGGTCTCTGAGTTCTTTGGGAGCATGTACAATGGTCACACTTCCTATTAAAGATGTTGCTGATGCTGAAGACCCTTTTACGTTTATAACATCTGATATCATCACCAAAGTACAATTATCACATGAATGTGCAAATTGCTACTATCTTAAAAGAGGGCAGTGTCATCTTGACAACTCACAGAAATTCCGTTGCAACAATGCTACAGCAAAAAACGGGTTGAGGCCGAAAGTTAAATTGGCTGTAGGTGTTGGAGTCCTGGGCATCTTGATAATTGGGTTGCTATTGATACTTATACTCTACAAACGGAAACATGCTACTTCAGGCGAAGACTTCCATTCAAGAAATTCTTATTTTGATTCCCCCTCAAATCTACACCTAGAAAGTGGAGGTGTGTACTTTGAAGTTCCAATCTTCTCCTACAAGGATCTTAAAGAAGCAACGAACAATTTCGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGGACTGTATACCATGGGAAACTCCAAGATGGACGGGAAGTTGCTGTGAAGCGCTTATATGAGCACAACTATAGGCGAGTAGAACAGTTCATGAATGAAGTTCAGATCCTCACACGTTTGCGCCACACAAATCTCGTGTCCCTCTATGGCTGCACTTCAAAGCACAGCCGCCAACTACTACTTGTGTATGAATATATTTCGAATGGCACCATTGCTTGTCATCTGCATGGTGGATTAGCAAAGCCTGGCTTACTACCATGGTCTATAAGAATGAAAATTGCCATAGAGACTGCTGCTGCATTGGCTTATCTCCATGCATCCGATATCATTCACCGTGATGTAAAAACAAACAACATTCTCCTCACCAAAAATTTCTGTGTTAAAGTTGCTGATTTCGGCCTTTCAAGACTATTCCCTACCGATGTGACTCATGTCTCCACAGCTCCACAAGGGACCCCGGGTTATGTAGACCCGGAATATCACCAATGCTATCAGCTTACTAGTAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGATATAAACAGGAGTAAGGAAGAGATTAACTTGTCCAATCTAGCTATAAAGAAGATTCAACAAAGTGCAATTAGTGAGCTGGTAGATCCTAGTCTTGGTTTTTGTTCAGATAATGAGGTAAAGAGGAAGATAGTTTCGGTGGCGGAGTTAGCTTTTCAATGTTTGCAAAGGGACAAGGAATTAAGACCTTCCATGGATGAAGTATTGAATGAATTGAGAAAAATCGAAGCCGGAGAGGATGAGCAAGAGGTTGTAGAAGGAGCAGATGCTCCTGTTGCTGGAGATTCACTTAGTATTGTACATACACGTTCAACCTCGGCTGAATGGGATGAAGTTGGATTATTGAAGAATATGAAACAGCCATCTTCACCAAACACTGTTACTGATAAGTGGGAAAGTAAATGTACTACGCCTAATGTGAGTGGTTGA 2016 0.3998 MASVYVFHFLLFSHLMLLLSASENEHGNKVECPPSFHCGHLGNITFPFTVTESPHCGLFVISNCDNINPSKPKNIQLENNGKLFWVIRLIHNPPTSANITIQIRDYSFYNLLESKSCEAFSNNYTLPTKFPFGSISISYSQTMFKCNRSLHVKPPKDVHSYTNCSDYDLYYKPSLNRNDRSLSSLGACTMVTLPIKDVADAEDPFTFITSDIITKVQLSHECANCYYLKRGQCHLDNSQKFRCNNATAKNGLRPKVKLAVGVGVLGILIIGLLLILILYKRKHATSGEDFHSRNSYFDSPSNLHLESGGVYFEVPIFSYKDLKEATNNFDHTKELGDGGFGTVYHGKLQDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHTNLVSLYGCTSKHSRQLLLVYEYISNGTIACHLHGGLAKPGLLPWSIRMKIAIETAAALAYLHASDIIHRDVKTNNILLTKNFCVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKPAVDINRSKEEINLSNLAIKKIQQSAISELVDPSLGFCSDNEVKRKIVSVAELAFQCLQRDKELRPSMDEVLNELRKIEAGEDEQEVVEGADAPVAGDSLSIVHTRSTSAEWDEVGLLKNMKQPSSPNTVTDKWESKCTTPNVSG* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1453 671 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1453 671 Gene3D Phosphorylase Kinase; domain 1 305 405 - -
Lan4g1453 671 MobiDBLite consensus disorder prediction 644 671 - -
Lan4g1453 671 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1453 671 SUPERFAMILY Protein kinase-like (PK-like) 314 609 IPR011009 -
Lan4g1453 671 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1453 671 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 671 IPR044652 -
Lan4g1453 671 MobiDBLite consensus disorder prediction 647 671 - -
Lan4g1453 671 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 671 - -
Lan4g1453 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lan4g1453 671 Gene3D Transferase(Phosphotransferase) domain 1 406 616 - -
Lan4g1453 671 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1453 Lan-Chr4 23650705 23653584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1453 21 671 Receptor kinase-like Gene Family AT1G25390 47.641 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan4g1453 Pkinase 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1453 - - gmx:100305407 800.431