Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1450 ATGGCCTCTGGTGAAGGTAGGCGGCAGCGCCATCATCACGATCTTGTGCCTCTTGCTGTATTGCTTAAGAGGGAGATGAAGAGTGAGAGGATGGGGATGGGGAAGCCAACTTTGAGGTACGGACATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAGTTAAGACAGATTGTCAGCGAGTGCCTGGGAACTCTTCATCATCCTTTTCCATATTCGCGATCTTTGATGGGCACAATGGAAATGCTGCTGCCATTTTTACAAGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTTCCTCGAGGGCTTGGACGTGATGAGTGGTTGCAAGCTTTACCTAGAGCATTGGTTGCTGGGTTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCAACATTTGTGATAGTCGACAGGTGGACTGTGACAGTTGCATCCGTCGGAGACTCTCGTTGTATTCTAGATACTCAGGGTGGTGCTGTTACCACTTTAACTGTTGATCACAGGTTTGAAGAGAATATTGAAGAGAGGGAACGTGTTACTTCAAGTGGAGGTGCAGTTGGGAGGCTTAGCATTGTTGGTGGTGTGGAGATTGGCCCTCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCTAGATCAATAGGAGACATGGATGTTGGGGAGTTCATAGTTCCAATACCGTATGTCAAACAAGTGAAGCTATCAAATGCTGGTGGGAGGCTTATAATTGCTTCTGATGGGATCTGGGATGCTTTATCCTCGGAAACGGCTGCAAAATCTTGTCACGGTTTGCCTGCTGAACTTGCTGCTATGCAAGTTGTAAAGGAAGCATTACGGACAAGAGGATTAAAGGACGATACAACTTGCATAGTAGTTGACATAATCCCTCCAGATAACGAGTTGCCATCAGCACCTGCCCCTAAAAAGCAGAACAAGCTGAGAGTCCTTTTGTCCAAGATGAGGTTCGGTGGTTCCACCAATAAGGTGTCAAAGAATCTTTCTGCTGTAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATTATGACAACTCAGGGAAATCAACATCTGGCCTTTTCGTCTGTGCGGTATGCCAAGTCGATCTTGCTCCAAGTGAGGGTATCTCTGTCCATGCCGGTTCTATTTTCTCCACCAGCTCAATGCCCTGGCAAGGTCCTTTTCTATGTTTAGATTGTCGTGATAAGAAGGATGCGATGGAAGGAAAACGTCCGAGTGGAGTTAAAGTATCATAG 1299 0.4611 MASGEGRRQRHHHDLVPLAVLLKREMKSERMGMGKPTLRYGHAAQSKKGEDYFLVKTDCQRVPGNSSSSFSIFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRFEENIEERERVTSSGGAVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSETAAKSCHGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPSAPAPKKQNKLRVLLSKMRFGGSTNKVSKNLSAVNIVEELFEEGSAMLAERLGNYDNSGKSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSMPWQGPFLCLDCRDKKDAMEGKRPSGVKVS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1450 432 CDD PP2Cc 77 301 IPR001932 -
Lan4g1450 432 SMART PP2C_SIG_2 55 301 IPR001932 -
Lan4g1450 432 SUPERFAMILY PP2C-like 41 301 IPR036457 -
Lan4g1450 432 PANTHER ALPHABET, ISOFORM E-RELATED 7 431 - -
Lan4g1450 432 Gene3D - 39 305 IPR036457 -
Lan4g1450 432 SMART PP2C_4 31 299 IPR001932 -
Lan4g1450 432 Pfam Protein phosphatase 2C 65 270 IPR001932 -
Lan4g1450 432 ProSiteProfiles PPM-type phosphatase domain profile. 32 301 IPR001932 -
Lan4g1450 432 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 7 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1450 Lan-Chr4 23633426 23637909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1450 1 431 PP2C-type Phosphatase Gene Family AT1G68410 76.484 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1450 - - gmx:100779571 759.985