Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1449 ATGGCTTCAGTTTATGCATTCCACTTCCTTTTGTTTTCTCACCTTATGCTACTTCTCTTGGCTTCTGAAAATGAATATGGAAACAAAGTAGAGTGTCCACCTTCATTTGACTGTGGACATCTTGGCAATATCACCTTCCCTTTCACTGTAACAGAAAGCCCTCACTGTGGCTTATTTGTCATAAGCAACTGTGATAATATTAATCCATCGAAGCCCAAAAATATTCAACTGGAGAATAATGGGAAATTGTTTTGGGTTATAAGGCTTATTCACAATCCTCCTACTTCTGCTAATATTACTATTCAAATTAGAGACTACAGTTTCTATAATCTGCTGGAATCCAAAAGTTGTGAAGCCTTTAGCAATAATTATACTCTTCCAACAAAATTTCCTTTTGGTTCTATTAGTATAGCTTACAGTCAAACCATGTTCAAGTGCAATCGCTCCCTCCATGTTGAGCCTGCAATCAATGTGCATAATTATACAAATTGTTCTGACTATGATCTTTACTACAAGCCTTCGCTTAATGGAAACGATAAGTCTCTGAGTTCTTTGCTCGCTTGTACAATGGTCACACTTCCTATTAAAGATGTTGCTGATGCTGAAGACCCTTTTACGTTTATAACATCTGATATCATCACCAAAGTACAATTATCATATGAATGTGCAAATTGCTACTATGTTAAAAGAGGGCAGTGTCACCTTGACAACTCAAAGAAATTTTGTTGCAACAATGGTTATGAGAAAACTGGAATGAAGCTGCTGATAGTGGCAACAGCGGCCTCATTGGCTGGAGTCGCTGTGCTGATGATCTTGGCTTACCGGTTTCGGACAAAGATCTTCCTTCCTACATATCTTTTGTTTGGGAAGGGTAATCCAACCAATCTAATTATTGAGAAGTTTTTGAAGGAACATGGAGATCTTCCTACAGCTAGGTACAGTTATTCAGAGGTCAAGAAAATGACCAACTCTTTCATAAACAAGTTAGGCCAAGGAGGATTTGGATGTGTATACAAAGGGAAGTTACAAGATGGCCGCGATGTTGCAGTGAAAGTTTTAACTGAATCAAAAGCTGATGGAGAGGAATTCATCAATGAAGTTGCAAGTATTAGTAGAACTTCACATGTTAACATTGTTAGACTTTTGGGGTTCTCTTTCAATGGTTCTAAAAGGGCACTAATATATGAATTTATGCCTAATGGTTCTCTTGAGAAGTTCATATACGAAGAGAAAAAACCTTCAAATGTTGATCTCCAAATTGATTGCCAGACATTATACGAAATTGCAATTGGCGTCGCTCGAGGATTAGAGTATTTGCATCGAGGTTGCAACACTAGAATTCTTCATTTTGATATAAAACCACATAACATATTGCTAGACGAGGATTTTTGTCCAAAAATTTCAGATTTTGGACTTGCTAAAATATGTACAAGAAAAGAAAGTATTGTATCCATATTTGGTGCAAGGGGTACTGCAGGATATATTGCTCCCGAGTTGTTTTCTAGAAATTTTGGTGGGGTGTCTCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTAGAAATGGTGGGTCAAAGAAAGAATATTAATGTCGCAGTTGATCGTTCTAGTGAGTTATACTTTCCACACTGGATTTACAAGCGTCTTGAAGTAAATGAGTTGCTTGGACTGCAGTGTATAAAAAATGAGAGTGATGAAGAAATGGTAAGAAAAATGAGTCTGGTGAGTCTATGGTGCATACAAACCAACCCTTCAAATAGACCTGCAATGAGTAAAGTGGTTGAAATGCTGGAAGGGAGCTCTGAAGTGTTGCAAATACCACCCAAACCTTTTCTATCTTCTCCTTCAACATCTCCAGCACACTTGAATTCTGAAACTTGTAGTTTGTCAGAATATTAG 1902 0.3738 MASVYAFHFLLFSHLMLLLLASENEYGNKVECPPSFDCGHLGNITFPFTVTESPHCGLFVISNCDNINPSKPKNIQLENNGKLFWVIRLIHNPPTSANITIQIRDYSFYNLLESKSCEAFSNNYTLPTKFPFGSISIAYSQTMFKCNRSLHVEPAINVHNYTNCSDYDLYYKPSLNGNDKSLSSLLACTMVTLPIKDVADAEDPFTFITSDIITKVQLSYECANCYYVKRGQCHLDNSKKFCCNNGYEKTGMKLLIVATAASLAGVAVLMILAYRFRTKIFLPTYLLFGKGNPTNLIIEKFLKEHGDLPTARYSYSEVKKMTNSFINKLGQGGFGCVYKGKLQDGRDVAVKVLTESKADGEEFINEVASISRTSHVNIVRLLGFSFNGSKRALIYEFMPNGSLEKFIYEEKKPSNVDLQIDCQTLYEIAIGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICTRKESIVSIFGARGTAGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGQRKNINVAVDRSSELYFPHWIYKRLEVNELLGLQCIKNESDEEMVRKMSLVSLWCIQTNPSNRPAMSKVVEMLEGSSEVLQIPPKPFLSSPSTSPAHLNSETCSLSEY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1449 633 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 625 IPR045874 GO:0004672
Lan4g1449 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Lan4g1449 633 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Lan4g1449 633 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Lan4g1449 633 MobiDBLite consensus disorder prediction 611 633 - -
Lan4g1449 633 Gene3D Phosphorylase Kinase; domain 1 301 397 - -
Lan4g1449 633 Gene3D Transferase(Phosphotransferase) domain 1 398 607 - -
Lan4g1449 633 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 625 - -
Lan4g1449 633 SMART serkin_6 323 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1449 633 Pfam Protein kinase domain 326 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1449 633 ProSiteProfiles Protein kinase domain profile. 323 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1449 633 MobiDBLite consensus disorder prediction 616 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1449 Lan-Chr4 23630070 23632840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1449 312 613 Receptor kinase-like Gene Family AT4G18250 63.226 2.81e-133 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan4g1449 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1449 - - cam:101490487 772.696