Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1448 ATGGCGGCATTACCCTTTCACTTCACAGTCCCCATTATCTACATCTTCTTCCTTTCACACTTCATTCTCCTTGTTCAAACTTCCACTACCCCAGATTTCAACGCTCTCATTTCATTCAAAAACGCTTCAGATACATCCAAAAAACTTACAATGTGGAACACCACTTCCGACCCATGCACTTGGAACGGTGTTTCATGCATCAACAACCGAGTCTCGCGACTCGTTCTCGAAAACTTCGACCTTCAAGGTTCTATTCTCCCCTTAACTTCTCTCACTCACCTTCGAGTTCTAAGCCTCAAGCATAACCGTTTCTCAGGTCCCATTCCCTCTCTCTCTAACTTCACCTCTCTTAAGCTTCTCTTTCTCTCTCATAACGCTTTCTCCGGTGACTTCCCTTCCACTGTTACCTCGCTTTCCTCTTTATACCGTCTTGATTTGTCGTATAATAACTTCTCCGGCGAGATTCCGGCGACGGTTAACCATTTGACCCACCTTCTCACTCTCCGTCTAGAAAACAACCAGTTTTCCGGTCACATTCCCGGTGTTAGTATTCCCAACCTCCAAGACTTCAATGTCTCCGGTAACCACCTCTCCGGCGAGATACCGGAGTCCTTTTCCGGTTTCCCTGAATCCTCTTTCCATCAAAACCCATCTCTTTGTGGAGCTCCGGTTCAGAAATGCAATTATACGGTTGCTGACCCTAATAAACCCGGTTCAGAAGGTGCCATTGCATCACCGGTTTCGCCATTGCCAACAGTGTCTTCTTCACCGAGTTCGTTACCATCAAACGAAGGACCAAGTAGCAAAACAACTCATAAAAACGGTAACGGAGGTTCCAAAATAAGCCATGTGGGTTTAATAGCAATTATAGTTGGTGATGTTTTAGTTCTTGCTATAGTGTGTGTACTCCTCTATTGCTACTTTTGGAGGAGCTACTCTAAAAAACTGAGAGAAGGAAAAGGTTCTAAGCTTTTCGAGAGCGAAAAAATTATTTATTCGTCGAGTCCATACCCTGCACAAGCAGGGTTTGATAGGGGTAGGATTGTGTTTTTTGAAGGTGAGAAAAGGTTTGAGCTTGAGGATTTGCTTCGCGCCTCGGCCGAGATGCTTGGGAAAGGTGGATTTGGGACTGCTTACAAAGCAGTTCTTGATGATGGGAATGTGGTTGCTGTAAAGAGACTCAAGGATGCACAGATTGGAGGGAAGAGGGAGTTTGAGCAACATATGGAAGTTCTTGGAAAGTTGAGGCACCCGAATATCGTTAGCTTGAGGGCCTATTATTTTGCAAGGGAGGAGAAGTTGCTGGTTTATGATTTCATGCCTAATGCTACATTGTTCTGGCTCCTTCATGGGAACCGTGGGCCCGGGCGAACTCCATTGGACTGGACCACAAGGCTCAAGATAGCAGCCGGAGCGGCCCGAGGTATAGCATTTATTCACAACTCATGCAAGTCACTTAGGCTCACCCACGGGAACATCAAATCCACAAACATCCTCCTTGACAAGCAAGGAAATGCACACGTTTCAGATTTCGGGCTCTCCATATTTGCAGTCCCTGGTGGCAGTTCCAATGGTTACAGAGCCCCGGAGGCAATTGCATCAGACGGTCGAAAACAGTCTCAGAAATCTGACGTGTACTCCTTTGGTGTTCTTCTTTTAGAGCTTTTGACCGGGAAGTGTCCCTCTTCCATGGTGGACAGTCATAGTGGGAGTGGGACTATTGATCTTCCTAGGTGGGTCCAGTCAGTGGTGAGGGAAGAATGGACAGCTGAGGTATTTGATATTGAGCTCATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGTTTGTTGCAGATTGCTATGGCTTGTACTGCTGCACCTGATCAACGCCCGAGGATGTGCCACGTGGTCAAGATGATCGACGAGTTGCGTGGGGTTGAGGTGTCGCCATGTAATGACATGCTGGACTCTGCCTCTGAATCACCTTCCTTGTCTGAAGATGCATGTGGAGCTAGTCAGTAG 2004 0.4691 MAALPFHFTVPIIYIFFLSHFILLVQTSTTPDFNALISFKNASDTSKKLTMWNTTSDPCTWNGVSCINNRVSRLVLENFDLQGSILPLTSLTHLRVLSLKHNRFSGPIPSLSNFTSLKLLFLSHNAFSGDFPSTVTSLSSLYRLDLSYNNFSGEIPATVNHLTHLLTLRLENNQFSGHIPGVSIPNLQDFNVSGNHLSGEIPESFSGFPESSFHQNPSLCGAPVQKCNYTVADPNKPGSEGAIASPVSPLPTVSSSPSSLPSNEGPSSKTTHKNGNGGSKISHVGLIAIIVGDVLVLAIVCVLLYCYFWRSYSKKLREGKGSKLFESEKIIYSSSPYPAQAGFDRGRIVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKREFEQHMEVLGKLRHPNIVSLRAYYFAREEKLLVYDFMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGIAFIHNSCKSLRLTHGNIKSTNILLDKQGNAHVSDFGLSIFAVPGGSSNGYRAPEAIASDGRKQSQKSDVYSFGVLLLELLTGKCPSSMVDSHSGSGTIDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMACTAAPDQRPRMCHVVKMIDELRGVEVSPCNDMLDSASESPSLSEDACGASQ* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1448 667 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Lan4g1448 667 Gene3D Phosphorylase Kinase; domain 1 345 439 - -
Lan4g1448 667 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Lan4g1448 667 PANTHER - 26 653 - -
Lan4g1448 667 SUPERFAMILY Protein kinase-like (PK-like) 368 634 IPR011009 -
Lan4g1448 667 Gene3D Ribonuclease Inhibitor 32 135 IPR032675 -
Lan4g1448 667 Gene3D Ribonuclease Inhibitor 136 183 IPR032675 -
Lan4g1448 667 MobiDBLite consensus disorder prediction 248 276 - -
Lan4g1448 667 ProSiteProfiles Protein kinase domain profile. 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1448 667 Gene3D Transferase(Phosphotransferase) domain 1 440 650 - -
Lan4g1448 667 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Lan4g1448 667 Pfam Protein kinase domain 368 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1448 667 MobiDBLite consensus disorder prediction 238 276 - -
Lan4g1448 667 SUPERFAMILY L domain-like 50 209 - -
Lan4g1448 667 Gene3D Ribonuclease Inhibitor 184 229 IPR032675 -
Lan4g1448 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1448 Lan-Chr4 23623663 23626999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1448 32 666 Receptor kinase-like Gene Family AT1G68400 66.359 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan4g1448 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1448 - - adu:107467433 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0450 20 3168404 3171370 Lan4g1448 4 23623663 23626999 LSH