Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1446 ATGGTGATGGGTTCGAAGATTGAAGGACCATCTACTCCAGCAAATCGACGTGATCCTTATGAGGTTTTATCTGTAACAAGGGACTCTACCGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAGGCTTCAGAACTATTTAAGGAGGTTGCATATTCTTATAGCATCTTGTCTGACCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTCAGGCACTTGATGCTGATAGCATGGACATGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATAAAGACTACTGTTTCAGCCAATGTACTTGAAGAAGCTCTTAATGGCACTGTTACAGTCAGACCCCTCCCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTCGGCGTGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTGATAAGAGCTACTTCTACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGTGGTTATGGTCTGGCATTACAGGAAGATAGCGAAAAAACTGGCAAGGTGACATCGGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAACTAAAGCCTGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAATCACATGAAGACATCACCCAAAAGCTTATGGACACTGAGGCTCAAATTTTAAGAAAGAGGAGTGAACTACGCCAATTTGAAACAGAATATAGAAAGGCACTGGCACGCTATCAGGAAGTGACAGATAGATACACAAAAGAAAAGCAGTCTGTAGATGAACTTCTGAAACAAAGGGATAGTATCCATTCTTCTTTCACTGTTGTCAAGTCAACCACTAGTAATTTAGGCAATGGAAGTTCTAGCAAAATTTCTGGCGAAGGGAGCCCCGAGGATGGAGGGTCAGATGGAAAGGATAAATCCGCCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGTTCTGATAAGAGCTAG 1209 0.4185 MVMGSKIEGPSTPANRRDPYEVLSVTRDSTDQEIKSAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFQALDADSMDMEIDLSNLGTVNTVFAALFSKLGVPIKTTVSANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAQSGIVIRATSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDITQKLMDTEAQILRKRSELRQFETEYRKALARYQEVTDRYTKEKQSVDELLKQRDSIHSSFTVVKSTTSNLGNGSSSKISGEGSPEDGGSDGKDKSAKKKWFNLNLKGSDKS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1446 402 Gene3D - 283 360 - -
Lan4g1446 402 CDD DnaJ 18 72 IPR001623 -
Lan4g1446 402 MobiDBLite consensus disorder prediction 377 402 - -
Lan4g1446 402 Gene3D DnaJ domain 4 100 IPR036869 -
Lan4g1446 402 Coils Coil 295 343 - -
Lan4g1446 402 PANTHER BNAA02G13770D PROTEIN 5 401 - -
Lan4g1446 402 SUPERFAMILY Chaperone J-domain 14 87 IPR036869 -
Lan4g1446 402 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 401 - -
Lan4g1446 402 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Lan4g1446 402 PRINTS DnaJ domain signature 20 38 IPR001623 -
Lan4g1446 402 PRINTS DnaJ domain signature 38 53 IPR001623 -
Lan4g1446 402 PRINTS DnaJ domain signature 55 75 IPR001623 -
Lan4g1446 402 PRINTS DnaJ domain signature 75 94 IPR001623 -
Lan4g1446 402 MobiDBLite consensus disorder prediction 358 402 - -
Lan4g1446 402 SMART dnaj_3 17 75 IPR001623 -
Lan4g1446 402 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Lan4g1446 402 Pfam DnaJ domain 18 80 IPR001623 -
Lan4g1446 402 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1446 Lan-Chr4 23603711 23609406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1446 11 90 C2H2 Transcription Factor Family AT1G74250 43.529 1.04e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1446 - - lang:109336585 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0469 8 6962379 6968524 Lan4g1446 4 23603711 23609406 LSH
Lan20g0452 20 3189872 3195491 Lan4g1446 4 23603711 23609406 LSH