Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1445 ATGGAGGACCCACAACTTGAATTCCATACTAAAACCACAAACTCCACTTCCCTCAAACTCTTCGGGTTCAACGTCCAAGAAGAAATCTTTGAAAACAAGGTGCTCCATAATGATGCAGCAACAGATTCAACAACTCAAAAGACCACTTCAACTTCAACCTCCCCTCCTTCTTCCTCCTCAGGTGAACGGAAATACGAGTGCCACTACTGTTGCAGAGAGTTTGCAAATTCACAAGCACTTGGTGGCCATCAAAACGCGCACAGAAAAGAGCGTCAACAACTCAAGCGTGCTCAGTTACAAGCCTCTCGAAACGCCCCCGTTTCGTACATCCGGAACCCCATCATCTCCGCCTTCACCCCTCCGCCGCACCTCCTCACTCCGCCACCGGGATCCGTAATGGTCCCGGCGGAAATGCCCTCGTGGGTGTACATGCCGCCACGTGCCGTACCACACGGTTGTGTGTTCTCTTCGGCGCAAAGCAAAACCATGTGTAATAATAGTAGTAGCCGTAATTATTATAGTGGTTGTTGTAATAGAGCAAAATATGCGGGTACAGAGTTTTTCCCCTATGTCGACACTGTAGTGGATCCCTCATCTGTAACCATGGGGTCGCAGGTACAGGCCCGGGCCCACCGCGGTAGAATTGATGATGGGCCCAATTTCGATGATGCATTGGGCTTGGATCTGCACCTTAGCCTTGCTCCTGCTGCGCCGTGA 717 0.5091 MEDPQLEFHTKTTNSTSLKLFGFNVQEEIFENKVLHNDAATDSTTQKTTSTSTSPPSSSSGERKYECHYCCREFANSQALGGHQNAHRKERQQLKRAQLQASRNAPVSYIRNPIISAFTPPPHLLTPPPGSVMVPAEMPSWVYMPPRAVPHGCVFSSAQSKTMCNNSSSRNYYSGCCNRAKYAGTEFFPYVDTVVDPSSVTMGSQVQARAHRGRIDDGPNFDDALGLDLHLSLAPAAP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1445 238 MobiDBLite consensus disorder prediction 40 61 - -
Lan4g1445 238 MobiDBLite consensus disorder prediction 40 62 - -
Lan4g1445 238 PANTHER ZINC FINGER PROTEIN GIS3 9 238 - -
Lan4g1445 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Lan4g1445 238 SUPERFAMILY beta-beta-alpha zinc fingers 61 92 IPR036236 -
Lan4g1445 238 PANTHER ZINC FINGER PROTEIN 5 9 238 IPR044299 GO:0010090
Lan4g1445 238 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Lan4g1445 238 Gene3D Classic Zinc Finger 39 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1445 Lan-Chr4 23589643 23590717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1445 5 237 C2H2 Transcription Factor Family AT1G68360 40.449 3.39e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1445 - - lang:109346352 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0453 20 3202445 3203416 Lan4g1445 4 23589643 23590717 LSH