Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1434 ATGAAGGTTAGTTGCAATGGGTGCCGCATTCTCCGTAAAGGTTGTGGTGACAACTGTGTAATTAGGCCATGCCTTGAGTGGATTAACTCACCGGAGTCTCAAGCCAATGCTACTATGTTCCTCGCCAAATTCTATGGCCGGACCGCCTTGGTCAACCTCATCTCCGCTGCTCCGGAACATCTACGCACAGATGTGTTCAAATCATTGTTGCACGAGGCTTGTGGGAGATTAGTGAATCCAACGTATGGGTCAATGGGTTTGTTATGGAGTGGAGAGTGGAACCGATGCGAAGCAGCCGTTGACGCAGTCTTGACTGGATCAAGGATTCTGGACGTGGCAGGTTTTGATTGGCACGCAACAAGAACACATGTTGGTGGTGCTGAAAATATTTTCCCAACATGTGATATTCGTCACGTGCCTAGAGCGAGGGACATGGACAACGTAGGAGAAAGAGGTCGTTCCAAAAGAGCAAGGAGAAATTTCAAGGCCACACCGCAACTGGGTGTGGTGGACTCGCCTGAGAATGAGAGCATGGAAACTGTGGAACAACCATTGAACCAAGGCGTTGCTGAAACCGAGCTCAATTTGGAGCTCACGCTAGCTTTCCCTTGCTAG 615 0.4959 MKVSCNGCRILRKGCGDNCVIRPCLEWINSPESQANATMFLAKFYGRTALVNLISAAPEHLRTDVFKSLLHEACGRLVNPTYGSMGLLWSGEWNRCEAAVDAVLTGSRILDVAGFDWHATRTHVGGAENIFPTCDIRHVPRARDMDNVGERGRSKRARRNFKATPQLGVVDSPENESMETVEQPLNQGVAETELNLELTLAFPC* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1434 204 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lan4g1434 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 204 - -
Lan4g1434 204 PANTHER LOB DOMAIN PROTEIN 1 204 - -
Lan4g1434 204 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1434 Lan-Chr4 23424909 23425960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1434 1 200 AS2 family AT3G02550 42.735 3.94e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan4g1434 LOB 2.4e-22 No_clan