Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1423 ATGGCGGTTATTGGAGGTGCAAGTTCCATTGGTGTTCATGGATGGGGAGACATAAAGAGTCTCTCTACCCAAGTCATCACCGGCCGGTGGTTTGTGGTGTTCGCCTCCTTCTTCATCATGGCGGCCGCCGGAGCCACCTACATGTTTGGTCTATACTCCCCAGAAATAAAACAAACACTTGGCTATGATCAAAGTACCCTCAATCTCCTTAGTTTCTTCAAGGACTTTGGTAGCAATGTTGGTGTTCTCTCTGGACTAATCAATGAGCTAACACCACCTTGGGTGGTGCTAGCAATTGGTGCTGTAATGAACTTTGTTGGGTACTTCATGATATGGCTTTCAGTAACTGAAAGAGTAGCAAAACCTCAAGTATGGCTCATGTGTCTTTATATTTGCATAGGTGCAAATTCTCAATCTTTTGCAAATACTGGTTCACTTGTTACTTGTGTTAAGAATTTTCCTGAAAGTCGTGGTGTTGTGCTAGGAATTCTGAAAGGGTATGTTGGTCTAAGTGGTGCAATCATCACACAACTATACTCAGCTATTTACTATGATGATACCAAGGCTTTGATTTTGTTCATAGGTTGGCTTCCAGCTGCTATATCCTTTGTTTTTCTTCGAACCATTCGGTACATGAAACCGGTTCGGCAATCTAACGAGGTTAAAGTTTTCTACAACTTTTTGTATATCTCACTTGGCCTAGCAGGGTTTCTTTTAGTTATGATTGTAATACAGAAAACAGTTCATTTCACTCAAAGTGAGTTTGGTGTAACTGCTGCTATAGTGGTTTTCTTGCTCTTCCTCCCAGTTGCTGTTGTTATCATTGAAGAGTATAAGACATGGCAGAGTAAAAAGTTTGCATTGGTTGATCCTTCCCCAGTGAAAATAGTTACTGAAGAGGTTGCAACAGAAGCTAATGGGATAACTGTGTTAGAACCAAAAGTGAATGAAACAGTTTTGACCAAAGACACTAGATGGTGGGAAAATGTGTTTAGTCCACCCAATAGAGGTGATGACTATACAATTCTTCAAGCACTATTTAGCATAGACATGTTAATCTTATTCATATCTTGCATTTGTGGTGTTGGAGGTACTTTAACTGCAATTGATAATCTTGGTCAGATAGGAACTTCACTTAGATACCCAAAGAGGAGCACAAGCACTTTTGTGTCACTGGTAAGCATTTGGAATTACCTAGGACGTGTTTTCTCTGGATTTGCTTCTGAATATTTTCTTAAAAAGTACAGATTCCCTCGTCCTCTTATGCTAACTTTGACTCTCCTCTTATCATGTGTTGGTCACTTATTGATAGCTTTTGATGTGAAAGATGGTCTTTATGTGGCTTCAGTGATTATTGGTTTTTGTTTTGGTGCACAGTGGCCTTTACTATTTGCCATAATATCTGAGCTATTTGGACTTAAATATTATGCAACTTTGTACAACTTTGGAAGTGTAGCGAGTCCACTTGGGTTATATGTGCTTAATGTTAAGATCACTGGGCATTTGTATGACAAAGAAGCTAAGGAACAATTAGCAGCATTGGGGATACAAAGAAAAGAAGGGCAGGAATTAAATTGTGTTGGGGTCAATTGTTTCAGATTATCTTTCATTATTATCACAGCTGCAACTTTATTCGGTGCTATAGTTTCATTAATACTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGGTTTAGGGAAGAGGCCAAGGTGGCAGAAAATGAAATGAAAGGGGTGGAGAAAAGAGGGAAAACAGTGGAAGATGGCAAAGTTGTTGGATGGGGATCACATGTCCCCATTCATGTCCCACTCGGTGTACCAAGTCAATCATAA 1845 0.3967 MAVIGGASSIGVHGWGDIKSLSTQVITGRWFVVFASFFIMAAAGATYMFGLYSPEIKQTLGYDQSTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAVMNFVGYFMIWLSVTERVAKPQVWLMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFVFLRTIRYMKPVRQSNEVKVFYNFLYISLGLAGFLLVMIVIQKTVHFTQSEFGVTAAIVVFLLFLPVAVVIIEEYKTWQSKKFALVDPSPVKIVTEEVATEANGITVLEPKVNETVLTKDTRWWENVFSPPNRGDDYTILQALFSIDMLILFISCICGVGGTLTAIDNLGQIGTSLRYPKRSTSTFVSLVSIWNYLGRVFSGFASEYFLKKYRFPRPLMLTLTLLLSCVGHLLIAFDVKDGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEAKEQLAALGIQRKEGQELNCVGVNCFRLSFIIITAATLFGAIVSLILVARTRKFYKGDIYKRFREEAKVAENEMKGVEKRGKTVEDGKVVGWGSHVPIHVPLGVPSQS* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1423 614 Pfam Nodulin-like 29 274 IPR010658 -
Lan4g1423 614 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 596 - -
Lan4g1423 614 Coils Coil 566 586 - -
Lan4g1423 614 PANTHER MFS TRANSPORTER 12 596 - -
Lan4g1423 614 CDD MFS_Mch1p_like 28 547 - -
Lan4g1423 614 Gene3D MFS general substrate transporter like domains 343 562 IPR036259 -
Lan4g1423 614 Gene3D MFS general substrate transporter like domains 24 218 IPR036259 -
Lan4g1423 614 SUPERFAMILY MFS general substrate transporter 230 560 IPR036259 -
Lan4g1423 614 SUPERFAMILY MFS general substrate transporter 29 272 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1423 Lan-Chr4 23256484 23258450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1423 16 572 Nodulin-like Gene Family AT2G39210 71.377 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1423 - - pvu:PHAVU_007G024800g 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1423 4 23256484 23258450 Lan4g1423 4 23256484 23258450 ECH