Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1415 ATGGCAGTTTGTGCAAAAGGTGTTCCTCACATGACTATGTCTGACATGAAGGGCCTCACCATCCAAGTCATTACTGGTCGATGGTTTGTGGTGTTTGTCTCCTTCATAATTTTGTCAGTCGCTGGAGCCACCTACATGTTTGGCCTCATCTCTAATGATATTAAAGCTTCTCTTGGTTATGACCAAACCACTCTCAACCTCATCAGTTTCTTCAAGGACTTAGGTGCCAACGTTGGTGTCCTCTCTGGTCTAGTTAATGAGATTACACCACCCTGGGTGGTACTAGCCATAGGTTCAGTTCTCAACTTCTTTGGCTACTTTATGATATGGTTAGCTGTGACCGGAAGAATAGCCAAACCTCAAGTATGGCACATGTGCTTATACATCTACTTAGGTGCTAACTCTCAAACTTTTGCTAATACTGGTGCCTTTGTTACTTGTGTCAAGAACTTCCCACAAAGCCGTGGGGTTGTGATAGGTATCCTCAAAGGGTATGTGGGTCTTAGCGGAGCTATCATTACACAACTATACTTTGCTTTTTACTACAATGACACTAAGGATTTGATTTTGCTCATTGCTTGGCTTCCAGCTGCTATATCTTTTGTTTTTATTCGAACTGTTAGATATATAGAGGTGGTTCATCAGCCTAATGAGCTCAATGTTTTCTACAAGTTTTTGTATATTTCACTTGGTCTTGCTGGGTTTCTAATGATTATGATCATAGTACAAAAAGAAGTTCCTTTCACACAAAGTGAGTATGGTGTAAGTGCTGCTGTGGTGCTTTTATTGCTCTTTCTTCCACTGGTGGTTGTTTTCTACGAACAATTTAAGATCCAGCAGAGCCAACAGCTTGTGTTTGTTGATAACTCATACTCTCTTTCATCAGCCCAAACATCAAACAATGATGATGCAAGAGTTTCCATAGAAGTTCAAGAAACAAGATGGTGGCAAAATATTTTTAGTCCCCCAGAAAGAGGTGAAGACTATACCATACTTCAAGCCCTTTTCAGCATTGACATGGCAATACTATTCATCTCTAGCACTTGTGGTTGTGGGGGTACTTTAACAGCAATGGACAACCTGGGTCAGATTGGAACCTCTCTAGGATACCCAAAGCAAAACATAAGCACTTTTGTGTCCCTAGTGAGCATTTGGGGTTACCTAGGACGTGTTTTTTCTGGGTTTGTTTCTGAACATTTTCTAGCCAAATACAACTTTCCAAGAACTATCATGCTCACTATGACACTAATCATATCATGTGTTGGTCATCTTCTAATAGCTTTCAATGTACCCAATGGTCTCTATGCAGCTTCAGTAATCATTGGGTTTTGTTTTGGTTCACAATGGCCTTTAGTTTTTGCCATAATATCAGAGTTATTTGGACTCAAGTATTATGCTACTCTCTATAACTTGGTCGGAGTAGCAAGCCCAATTGGGCTATATGTGCTTAATGTGATGGTCACTGGGCACTTGTATGATAAAGAAGCTAAGAGACAATCGGTATCAAACGGGGTCGAAAGAAAGATTGGTCAAGAATTGAATTGTGTTGGTGCAAGTTGCTTCAAGTTGTCGTTCTTTATTATCACTGCAACAACTTTGTTTGGTGCCATTATTTCGCTCATATTGGTAGCGAGGACATTCAAGTTTTATAAAAGTGACATATACAAGAGATACAAGGAGCATGATGAAGGTCATACGACGGAGGTGGCGGTGGTCCTTAATGGTGGCGAGAGAAGACAAAAGCCCAAAGTTGAGATGTGA 1761 0.4055 MAVCAKGVPHMTMSDMKGLTIQVITGRWFVVFVSFIILSVAGATYMFGLISNDIKASLGYDQTTLNLISFFKDLGANVGVLSGLVNEITPPWVVLAIGSVLNFFGYFMIWLAVTGRIAKPQVWHMCLYIYLGANSQTFANTGAFVTCVKNFPQSRGVVIGILKGYVGLSGAIITQLYFAFYYNDTKDLILLIAWLPAAISFVFIRTVRYIEVVHQPNELNVFYKFLYISLGLAGFLMIMIIVQKEVPFTQSEYGVSAAVVLLLLFLPLVVVFYEQFKIQQSQQLVFVDNSYSLSSAQTSNNDDARVSIEVQETRWWQNIFSPPERGEDYTILQALFSIDMAILFISSTCGCGGTLTAMDNLGQIGTSLGYPKQNISTFVSLVSIWGYLGRVFSGFVSEHFLAKYNFPRTIMLTMTLIISCVGHLLIAFNVPNGLYAASVIIGFCFGSQWPLVFAIISELFGLKYYATLYNLVGVASPIGLYVLNVMVTGHLYDKEAKRQSVSNGVERKIGQELNCVGASCFKLSFFIITATTLFGAIISLILVARTFKFYKSDIYKRYKEHDEGHTTEVAVVLNGGERRQKPKVEM* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1415 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 581 - -
Lan4g1415 586 SUPERFAMILY MFS general substrate transporter 27 271 IPR036259 -
Lan4g1415 586 Pfam Nodulin-like 27 272 IPR010658 -
Lan4g1415 586 SUPERFAMILY MFS general substrate transporter 317 548 IPR036259 -
Lan4g1415 586 Pfam Major Facilitator Superfamily 360 543 IPR011701 GO:0022857|GO:0055085
Lan4g1415 586 PANTHER MFS TRANSPORTER 10 581 - -
Lan4g1415 586 CDD MFS_Mch1p_like 26 536 - -
Lan4g1415 586 Gene3D MFS general substrate transporter like domains 335 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1415 Lan-Chr4 23212117 23214158 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1415 15 561 Nodulin-like Gene Family AT2G39210 67.084 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1415 - - gmx:100808975 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1415 4 23212117 23214158 Lan4g1415 4 23212117 23214158 ECH
Lan20g0482 20 3533059 3534874 Lan4g1415 4 23212117 23214158 LSH