Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1412 ATGGGTAAGAAATCTCTGAAGCTGCTATCTCTTTTCAAAACCAAAGAAGCACCACACAAAAAACAGCATCATCCATGGCAGTTCTTACCCTCTTGTAGCCACTCAAAGACTCTCTCATTTCGTGCTGGTGATACCATCTTCAAGACAGTTAACTCAGTATTCTTTGACCCTTCTTCAGAAACCACCATTGAAACTCCAGAGTCATGGTTCACAACCTCATCTGAATCTGCAAGTTTCTCAACTGAGTCAGAAGAGTATTGCCACTATGATGGTGAGTCTTTGGAGATATTGGTACGTGGGGTTAGATCAGAGAGGCTGTTTTTTGAACCAGGTGACACAAGCTCTATCTTAGAAAAAGCTAAAGTTATTGGTTTTCCATTCAAGGAAAGTGTTGTGTTAGCTATAGAGTCAGATGACCCATATGAAGATTTTAAAAGATCAATGGTGGAAATGGTTGAGTCTCATGGAGTTAAAAGTTGGGAAGGTTTGGAAGAACTTTTGAGTTGGTATTTGAGGGTGAATGGTCAGAATAATCATGGGTTTATAATTGGTGCTTTTGTGGATTTACTTAGTAGTATGGTAGCTTCTAATTCTTGTTCTGAGTCAACTACTTATTCTTCTGCTGTTTCTTCTTTTTCTTCTTCTCCTTTGTGTTTAACTGAGACTCAGAATGAGATTATTGAACTTGAGCCTGTAACATCTTAG 705 0.3858 MGKKSLKLLSLFKTKEAPHKKQHHPWQFLPSCSHSKTLSFRAGDTIFKTVNSVFFDPSSETTIETPESWFTTSSESASFSTESEEYCHYDGESLEILVRGVRSERLFFEPGDTSSILEKAKVIGFPFKESVVLAIESDDPYEDFKRSMVEMVESHGVKSWEGLEELLSWYLRVNGQNNHGFIIGAFVDLLSSMVASNSCSESTTYSSAVSSFSSSPLCLTETQNEIIELEPVTS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1412 234 PANTHER TRANSCRIPTION REPRESSOR OFP13 7 217 - -
Lan4g1412 234 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 193 IPR006458 -
Lan4g1412 234 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
Lan4g1412 234 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 217 IPR038933 GO:0045892
Lan4g1412 234 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1412 Lan-Chr4 23177152 23178096 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan4g1412 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1412 - - gmx:100527123 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1082 5 24130561 24131476 Lan4g1412 4 23177152 23178096 ECH
Lan4g1412 4 23177152 23178096 Lan4g1412 4 23177152 23178096 ECH
Lan8g0443 8 6630635 6631474 Lan4g1412 4 23177152 23178096 LSH