Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1395 ATGTCTCGTGCAGCAGGAGCAGCGAAGGGGAAGAAGAAGGGTGCAACATTCGTCATAGAATGCGCCAAACCTGTGGAAGATAAGATTATGGACATTGCTTCTCTCGAGAAGTTCCTTCAGGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCACTCGGTGATTCCGTTACCGTTACTCGTGAAAAGACTAAGATCACCGTCACCTCCGATTCCAACTTCTCTAAACGGTACCTTAAGTACTTGACCAAAAAGTACTTGAAGAAGCACAATGTTAGGGATTGGCTTCGGGTGATTGCCTCCAACAAAGACAGGAATGTCTATGAGTTGAGGTACTTCAACATTGCAGAGAATGAGGCTGAAGAGGAAGACTAA 372 0.4597 MSRAAGAAKGKKKGATFVIECAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEAEEED* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1395 123 PANTHER 60S RIBOSOMAL PROTEIN L22 1 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lan4g1395 123 Pfam Ribosomal L22e protein family 13 121 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lan4g1395 123 Gene3D - 4 123 IPR038526 -
Lan4g1395 123 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1395 Lan-Chr4 23023875 23025108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1395 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.677 1.23e-64 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1395 K02891 - twl:120011125 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1395 4 23023875 23025108 Lan4g1395 4 23023875 23025108 ECH