Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1382 ATGGCGGCATTGTCGTTTTCAGTGGCGTCTGTGGTAGAGGAAGTGCTTCATCAGCATGGTACTCGCCTCAAAGATCTTGATATGGAATCTAGAAAAACAGAAGAAGCTGCATTTAGAAGGTATGATGCATCAGGGTGGCTGAGAAAAATGGTAGGAGTTGTTGCAGCTAAAGATTTACCAGAAGAGCCCTCTGGGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATCCTATGCAATGTTCTTAACAAGGTTCGACCTGATGCTGTGCCTAAGGTTGTGGAAAGTCCTGTTGATTCTGCATTAATCCCTGATGGGGCACCATTATCAGCATTTCAGTATTTTGAAAATGTGAGGAACTTTTTGGTAGCCATCCAGGAAATTGGAATTCCTACTTTTGAAGCATCTGATCTGGAACAAGGAGGAAAACCAGCCAGGATTGTGAACACTGTATTGGCCCTTAAATCCTATAGTGAATGGAAGCAGACTGGGGATAATGGTGTTTGGAAATTTGGTGGGACTATGAAACCCGCAACCTCTACAAAAACTTTTGTGAGGAAAAACTCGGAACCATTTACTAAATCCTTGTCAAGGAACTCCTACATCAATGAAAAATCTCTTGCTGATTTTAACTCTGACGTTGAGTCTAATAAAATGTCTGGTTCTTATTCCTTGAGTATGCTTGTTCGTGCAATTCTATTAGATAAGAACCCAGAAGAAGTTCCATCGTTGGTTGAATCTGTTTTGAATAAGGTCGTAGAGGAGTTTGAGCATCGCATTGCAAGCCAATTTGAACAGACAAAAATAAGTTCAAGAGGTGCTGTTTCTCAAAGCAATGGATCCATATCGAAGTTTGTTATGGCAGATAAAAAGGTGGAGAATAATATTCCAAGGTTAACAAAGAAAGAGGGATTCATCCATAAAAACCATGTTGCTGATGAGGAGTCGCAAAGACAGCTTCTGAAGAAACACATGCTATTTGATCAACAGCAAAGAGATATCCAAGAACTAAAGCACACACTTCACACCACAAAAGCTGGTATGCAGTTCATTCAAATGAAATTCCATGAGGAGTTCTCAAATCTCGGCATGCACATTCATGGCTTGGCTCATGCTGCTTCTGGATATCGTAGAGTTCTTGAAGAAAACCGCAAACTATACAATCAAGTCCAAGATCTCAAGGGAAGTATTAGAGTGTACTGTCGAGTTAGACCCTTCTTATCTGGACAACCAAATTTTGTGAGCTCGGTGGATAGTATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGACGAAGATCCTTCAACTTCAACAAAGTCTTCGGACAATCTTCTGGCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGACGGATTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATCACTGAGAAAAGCCAAGGTGTAAACTATAGGGCTCTGAGTGATTTATTTCTTACAGCAGATCAAAGAAAGGACACTTTTCACTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACGGATGGAACAAACAAAAGATTAGAAATTCGTAGTAATTCAAATAAAGGGCTCAGCGTACCAGATGCAAGCCTGGTCCCAGTATCATCAACAATTAATGTTATTGAACTAATGAACCTGGGGCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTAACTGTTCATGTTCAAGGAAGAAACTTGACATCTGGAACTCTCCTACGTGGATGCATGCATCTGGTTGATTTGGCGGGGAGTGAGAGGGTTGACAAATCTGAGGCCACCGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAGCTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTTATGTTTGTTCACATAAGTCCAGAGGCTGATTCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCAACAGTTGAACTTGGAGCTGCAAGAGTAAATAAGGATGGTGCTGATGTCAAAGAGCTCAAAGAACAGATTGTGAGCCTTAAGGCAGCATTGGCAAGAACAGAAGTAAAACCAGGCCATGCGTTATCTGCCAGCTCTGGAAAATATAGGACAACGGAAGCTAGTGAGCTATCATCTTATCATGCAACCCAGCGCAATGCAGACATTGTTGGTGATCTCTGCCGGCAACCAATGGTTGATGTAGGCAATTTTGAGCTTCACAGTAATACCATATTGAGGGGAAAAAGACAGAGCTTTAATTTTGATGATATATCCGCAAATTCACCGCCCTGGCCCGCGGTGAAAAGTCCTGGACCAAACTACAGGGAGGATGATAGAGAAACTGTATCAGGAGAGTGGGTTGATAAGGTGATGGTAAACAAAGCTGAGAGCATGTTAGGGGGGTGTTGGGAAGCAGACAGTGGGAACTTATCTGATGTATTTTATCAGAAATATCTCCAACATTCTTCCGAAACATACTCGCAACAATCCTACAATAATATGCTCATGGGTGGCAACCAGTTTAACATTGTTGGATCAGATACAATGGATGATCTTGATGCTGCAACCAGTGATTCCTCAGAACCCGACTTACTTTGGCAGTTTAATCATTCCAAACTTACCACCTTAGCCAATGAAAATGGATCAAAGGCTAGTAGAAAACTTGTCTCAAAGTCATCAAAAAGCCCGGGATTAAGGAGGAATACTATCAATTCTTCTCTTAGTCCTTCACCTTCAAGGAAACAAGCAAATGGTGTATTACATCAATCAGGACGGCATCCTGCTCCAGTTGACATGAAACACAAGAGTCGGAGTAGAAAGTAA 3018 0.4148 MAALSFSVASVVEEVLHQHGTRLKDLDMESRKTEEAAFRRYDASGWLRKMVGVVAAKDLPEEPSGEEFRLGLRSGIILCNVLNKVRPDAVPKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKPARIVNTVLALKSYSEWKQTGDNGVWKFGGTMKPATSTKTFVRKNSEPFTKSLSRNSYINEKSLADFNSDVESNKMSGSYSLSMLVRAILLDKNPEEVPSLVESVLNKVVEEFEHRIASQFEQTKISSRGAVSQSNGSISKFVMADKKVENNIPRLTKKEGFIHKNHVADEESQRQLLKKHMLFDQQQRDIQELKHTLHTTKAGMQFIQMKFHEEFSNLGMHIHGLAHAASGYRRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQPNFVSSVDSIEDGTITISIPSKNGKGRRSFNFNKVFGQSSGQAEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLTADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSNSNKGLSVPDASLVPVSSTINVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRNLTSGTLLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADSIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIVSLKAALARTEVKPGHALSASSGKYRTTEASELSSYHATQRNADIVGDLCRQPMVDVGNFELHSNTILRGKRQSFNFDDISANSPPWPAVKSPGPNYREDDRETVSGEWVDKVMVNKAESMLGGCWEADSGNLSDVFYQKYLQHSSETYSQQSYNNMLMGGNQFNIVGSDTMDDLDAATSDSSEPDLLWQFNHSKLTTLANENGSKASRKLVSKSSKSPGLRRNTINSSLSPSPSRKQANGVLHQSGRHPAPVDMKHKSRSRK* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1382 1005 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1002 - -
Lan4g1382 1005 CDD CH 39 154 IPR001715 GO:0005515
Lan4g1382 1005 Gene3D - 24 187 IPR036872 -
Lan4g1382 1005 SMART ch_5 39 157 IPR001715 GO:0005515
Lan4g1382 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 754 IPR027417 -
Lan4g1382 1005 MobiDBLite consensus disorder prediction 945 1005 - -
Lan4g1382 1005 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 SUPERFAMILY Calponin-homology domain, CH-domain 46 169 IPR036872 -
Lan4g1382 1005 Gene3D Kinesin motor domain 391 759 IPR036961 -
Lan4g1382 1005 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
Lan4g1382 1005 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1002 - -
Lan4g1382 1005 Coils Coil 735 755 - -
Lan4g1382 1005 Pfam Kinesin motor domain 420 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g1382 1005 MobiDBLite consensus disorder prediction 945 984 - -
Lan4g1382 1005 CDD KISc_C_terminal 394 723 - -
Lan4g1382 1005 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1382 Lan-Chr4 22922140 22928733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1382 362 721 Calmodulin-binding Proteins AT5G65930 40.437 1.35e-76 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0417 8 6386843 6393036 Lan4g1382 4 22922140 22928733 LSH
Lan20g1157 20 15862577 15867623 Lan4g1382 4 22922140 22928733 LSH
Lan4g0983 4 13590061 13598085 Lan4g1382 4 22922140 22928733 PCT
Lan4g1382 4 22922140 22928733 Lan4g0983 4 13590061 13598085 PCT