Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1369 ATGGCTTCGATTCAACGCGCTGCTGTGAGTTCAGGATCGGAAGGTGGAGATCCTGCTACGTTGGACGAGAGGAAGAGGAAGAGGATGATATCGAACCGCGAATCCGCAAGGCGATCACGGTTGAGGAAACAGAAGCTTCTGGAAGATTTGACTGAGGAAGTGAATCGATTGCAAGGAGCGAGCAAGGACATAATTGAGACAATAAAGAAGAAGGAAGATGCATATTTGAAGATGGAATCTGCCAACAACATTCTCAGAGCACAGACAGTGGAGCTCACAGATCGGTTACAGTCTCTGAATTCGATCATTAAGAGGGCTGAAGAGGTTAACGGTAACGGTTTCGCCTCCGAGAAGCCTCAGATTTCAGATCCTCTCATGAACCCGTGGCAGCTGAATTATCCGTTTCATCCTCTAATGGCGTCTCCTGATATGTTCCTGCGTTGA 444 0.4775 MASIQRAAVSSGSEGGDPATLDERKRKRMISNRESARRSRLRKQKLLEDLTEEVNRLQGASKDIIETIKKKEDAYLKMESANNILRAQTVELTDRLQSLNSIIKRAEEVNGNGFASEKPQISDPLMNPWQLNYPFHPLMASPDMFLR* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1369 147 MobiDBLite consensus disorder prediction 1 40 - -
Lan4g1369 147 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Lan4g1369 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Lan4g1369 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Lan4g1369 147 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 145 - -
Lan4g1369 147 Coils Coil 33 67 - -
Lan4g1369 147 MobiDBLite consensus disorder prediction 18 40 - -
Lan4g1369 147 Gene3D - 22 107 - -
Lan4g1369 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 70 IPR004827 GO:0003700|GO:0006355
Lan4g1369 147 SUPERFAMILY Leucine zipper domain 24 73 IPR046347 GO:0003700|GO:0006355
Lan4g1369 147 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Lan4g1369 147 Pfam bZIP transcription factor 24 82 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1369 Lan-Chr4 22638306 22639517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1369 1 145 bZIP Transcription Factor Family AT3G62420 50.676 1.07e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan4g1369 bZIP_1 9.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1369 K25786 - jre:108981706 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1369 4 22638306 22639517 Lan4g1369 4 22638306 22639517 ECH
Lan8g0401 8 6163996 6165130 Lan4g1369 4 22638306 22639517 LSH
Lan20g0541 20 4072167 4073282 Lan4g1369 4 22638306 22639517 LSH