Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1366 ATGGCGCGTGAAACGGAAGCAGAAATTACGTTACGTGGTAGACCCTCCACCAAAAGAAAACAGCATGGAGAGCCAGAAGAAGATGATGATGCTGTTAGAGACTTGTCAATCAAGATAAATCAGTTGAAAAAGCAAATTCAGGAAGAGAGAATTGTGTTCATTAAAGAGAAAATTCAGAAGAATGAGCACAAACTACAATGTCATATTTCTGGGGTCACTTCAGCAACATCAAGACTTTACTCTTCGCAGACGGAGGAAAATAGGTCAATTCCATTGCTTTCTTCACGAATTGACCATCCTTTATGTAAAGTCAGTGGTTCCTCTCAGGGTTCAGGAGACAATGACCACAACAATCAAGATATATTAGCTACAACAAGTATCAAGATTCCATACATCGAAAGATTACCACCGTATACATCTTGGATTTTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGACGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTGATAGAATCTGAGGAAGAAAAACATGAGTTTTCTGAGGCTGAAGACCGCGTTCTATGGATGGCGTTTGAGGAACATGGGTTAAATGAGGAGGTATTGAATATTGTTAGCCAGTTTGTTGGTGGCACCAGTTTAGAAATTCAGGAAAGGTACAAAAGTATCAAGGAAAAGAATATTAGTAGGTTGGACCAACATTCAGAAGGCTCAAGAGAATATGAATCTCCCGTTGGCATATGTTTGGGGGGAAACCTGAGTGCTGCATTAGATTCTTTTGATAATCTCTTCTGTCGTCGGTGCCTGGTTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCCTTGATATATCCTTGTGAAAAGCTAACAGTTTGGTCCGAGCCTGAAGTTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGATAAGAAAACTACAATTATGAAAGAGACAGATCAGGTAATGGCACCCTATAGTGCAGAGGAACCTGGAAATCAAAGTATTACACACCCTCCAACAGAAGTTAATTGTCGTGGAGAGCTCAATTTAAATGTTCCTGTCTCAGAAAGTATGGGGAAACATAAAGTCACTGATCAGTCAGACAGAGCTCTATGTGACTCGACATTGTCTTCTGATGATTCTCAGAATTCTTGTAAAAAGCTGAAAAGAATCTCTAATGATGCAGTTACTGCAATCAATAATTCTAGTGAGAACCTAAGTTTGGGTGCATTTCATGAAAGTAAACTCACAATTGCATGTGTAACTCTAGACAAATCTGTTGAACATACTCCAAATAAGTTAACTGTTTCTTCTAGCATTTGCCATGGTGATCATGGCAAAAGTATCGGGGACAGACCAAAAGATGTCACAAATGAGACAGAATTGAAGTTGTTGTCCAATTCAATGGAACTAAATCTCACTCATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATAGAAGTAGCTAGTTACATGCAAGCTGGTGGAAAGTCCATGCCCCCTGGATCCATCGTTGCACCAAGTTCAATCATGGGCGACAAAGGAAAAATTGATGGAGTGTGCACAGACCAAGAGATACCATCAAGATCACGGATGCTGAGGAAAAAGGGCAAAACAAGAAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAGTTGCTGATGGGAAGAACCAATCATGCCAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGCCCTTGTGTTAATGCTGGAACTTGTTGTGAAAAATATTGTGGTTGTTCGAAGAGCTGCAAAAACCGGTTCAGAGGGTGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTATGTCGAAATTGCTGGGTTAGTTGCGGGGATGGTTCATTAGGGGAGCCACCTCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTTGCTGGGTGGGGAGCTTTCTTGAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAGTACACAGGGGAACTAATCTCCCACCGAGAAGCAGACAAACGTGGGAAAATTTATGATCGTGCAAACTCTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAACTGCTATGCAAAGGTAATGCTGGTTGCTGGAGATCATCGAGTAGGCATCTTTGCCAAGGAACATATTGATGCTAGCGAGGAGCTCTTCTATGATTATTGCTATGGTCCAGATCAAGCACCGCCATGGGCTCGTAAACCCGAGGGTTCCAAGAGAGATGAATCATCAGTTTCTCAAGGGAGAGCAAAGAAACACCAGTCTCATTGA 2562 0.4188 MARETEAEITLRGRPSTKRKQHGEPEEDDDAVRDLSIKINQLKKQIQEERIVFIKEKIQKNEHKLQCHISGVTSATSRLYSSQTEENRSIPLLSSRIDHPLCKVSGSSQGSGDNDHNNQDILATTSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELIESEEEKHEFSEAEDRVLWMAFEEHGLNEEVLNIVSQFVGGTSLEIQERYKSIKEKNISRLDQHSEGSREYESPVGICLGGNLSAALDSFDNLFCRRCLVFDCRLHGCSQPLIYPCEKLTVWSEPEVDRKPCSDQCYLQDKKTTIMKETDQVMAPYSAEEPGNQSITHPPTEVNCRGELNLNVPVSESMGKHKVTDQSDRALCDSTLSSDDSQNSCKKLKRISNDAVTAINNSSENLSLGAFHESKLTIACVTLDKSVEHTPNKLTVSSSICHGDHGKSIGDRPKDVTNETELKLLSNSMELNLTHWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCIEVASYMQAGGKSMPPGSIVAPSSIMGDKGKIDGVCTDQEIPSRSRMLRKKGKTRKFKYSWKSAGHPSIWKRVADGKNQSCQQYTPCGCQPMCGKECPCVNAGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYCYGPDQAPPWARKPEGSKRDESSVSQGRAKKHQSH* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1366 853 Pfam CXC domain 643 674 IPR041355 -
Lan4g1366 853 SMART sant 484 534 IPR001005 -
Lan4g1366 853 SMART sant 187 237 IPR001005 -
Lan4g1366 853 SMART CXC_2 639 676 IPR033467 -
Lan4g1366 853 SUPERFAMILY SET domain 605 822 IPR046341 -
Lan4g1366 853 ProSiteProfiles SET domain profile. 704 819 IPR001214 GO:0005515
Lan4g1366 853 Coils Coil 32 52 - -
Lan4g1366 853 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 26 851 IPR045318 GO:0006338|GO:0018024
Lan4g1366 853 ProSiteProfiles CXC domain profile. 591 690 IPR026489 -
Lan4g1366 853 Pfam SET domain 715 818 IPR001214 GO:0005515
Lan4g1366 853 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 26 851 - -
Lan4g1366 853 Gene3D SET domain 605 820 IPR046341 -
Lan4g1366 853 MobiDBLite consensus disorder prediction 830 846 - -
Lan4g1366 853 CDD SET_EZH 704 820 - -
Lan4g1366 853 MobiDBLite consensus disorder prediction 1 32 - -
Lan4g1366 853 Coils Coil 174 195 - -
Lan4g1366 853 MobiDBLite consensus disorder prediction 825 853 - -
Lan4g1366 853 SMART set_7 704 825 IPR001214 GO:0005515
Lan4g1366 853 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 853 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1366 Lan-Chr4 22615177 22624852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1366 693 822 C2H2 Transcription Factor Family AT2G23740 26.531 5.12e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan4g1366 SET 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1366 - - gmx:100808730 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1366 4 22615177 22624852 Lan4g1366 4 22615177 22624852 ECH