Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1365 ATGAGATTGGTTATATTATTACCATTATTATGTTGCATGGTTGAATGTGGTAATGTATATGATAAAACACTAGAAGCTTCATCAACTATACCATTAAACAAAAGAAGTGAAATACAGCCTCCAATTTCTGGTTTTCATAGTATTGCTCCTCTTCGTTCAGTTGATGTTGAAGTTCCTTCTCCTTTGCCACGCCTTCCATTGTCTCCTTATGTTTCAAATTGTTGTAAACAAGACATGGTTTTGAAACGAGGGAGTAAGGGATGCCACTGTGCTTATCCCATAAAACTAGACATTCTTCTTTTGAACGTCTCTCAAGACCCTAACTGGGGTATTTTTCTTGATGAATTTTCCACCCAGCTTGGGCTCAAAACTAGCCAAGTTCAAATCGTCAACTTTTATTTGCCCACCATATCAACATTGAATATATCGATGGATATTACTCCACATAAAGGGATCAGTTTCTCTGCTGATGAAGCATCAAGAATAAACTCTTCGCTTCTACAGCACAAGGTTAAACTAGACCATAGCTTAGTGGGTGACTTCAGACTTCTCAATATAACCTGGTTTCAACCTCCACCTCCTTCTCAAGCTCCTACTGTTGATGCGTCACCTAAAACTCCTGTGTATCATTCACCCACAGCTACAACATCAAGAACTTCAGACAGGGGAAGGCATTCAGATTTGCTTCTTATTCTTGGAATTGTTATTGCCATACTCTTGATTTCCGTCACATGTGTACTTATACTTTGTTTATGCACATGGAGGCCAAAAACAAACAAAACCCCCACAGAAACTGAAAAGCCAAGGGTGGAAAGTCCAGTTGCAGCTGTCAGAGCTATTCCTCATCCATCCAGCACACGCTTTATTGCTTATGAAGAACTTAAAGAAGCAACTAAGAATTTCGAACCAGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTGAATGATGGGACTGCTGTTGCAATCAAGAGGCTTACTAGTGGAGGGCAACAAGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGATTGCATCATCGTAACCTTGTAAAACTGGTCGGGTACTATAGTAATCATGATGCATCACAAAACCTACTTTGTTATGAGCTTGTCTCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACCTTCATGAAGATTCGCAGCCTTGTGTTATACACAGAGATTTTAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAAAAGGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTTTTGACCGGAAGGAAACCCGTGGATATGTCACAGCCATCTGGACAAGAGAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAATTAAGGAGCGGCTGGAAGAGCTTTCTGATCCAAGGCTCGAGGGAAGATATCCAAAGGAGGATTTTGTCAGAGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAGGCCAACGACCCACAATGGGTGAAGTGGTACAGTCTCTTAAAATGGTGCAGCGTGTCACAGAATATCACGATTCCATTGTGCCCTCATCCAACACGCGACCGAACCTGAGACAGTCTTCTACTACTTATGAGTCTGATGGGACATCTTCTATGTTTTCTTCCGGTCCTTACTCTGGTCTGAGTGGCTTTGACTATGACAACATTTCTAGGACGGCGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1938 0.4231 MRLVILLPLLCCMVECGNVYDKTLEASSTIPLNKRSEIQPPISGFHSIAPLRSVDVEVPSPLPRLPLSPYVSNCCKQDMVLKRGSKGCHCAYPIKLDILLLNVSQDPNWGIFLDEFSTQLGLKTSQVQIVNFYLPTISTLNISMDITPHKGISFSADEASRINSSLLQHKVKLDHSLVGDFRLLNITWFQPPPPSQAPTVDASPKTPVYHSPTATTSRTSDRGRHSDLLLILGIVIAILLISVTCVLILCLCTWRPKTNKTPTETEKPRVESPVAAVRAIPHPSSTRFIAYEELKEATKNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNHDASQNLLCYELVSNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKKAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRIKERLEELSDPRLEGRYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYHDSIVPSSNTRPNLRQSSTTYESDGTSSMFSSGPYSGLSGFDYDNISRTAVFSEDLHEGR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1365 645 SUPERFAMILY Protein kinase-like (PK-like) 279 578 IPR011009 -
Lan4g1365 645 Gene3D Phosphorylase Kinase; domain 1 264 378 - -
Lan4g1365 645 Gene3D Transferase(Phosphotransferase) domain 1 379 595 - -
Lan4g1365 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lan4g1365 645 PANTHER OS01G0750732 PROTEIN 23 645 - -
Lan4g1365 645 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Lan4g1365 645 ProSiteProfiles Protein kinase domain profile. 301 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1365 645 CDD STKc_IRAK 307 577 - -
Lan4g1365 645 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 23 645 - -
Lan4g1365 645 MobiDBLite consensus disorder prediction 195 221 - -
Lan4g1365 645 MobiDBLite consensus disorder prediction 587 614 - -
Lan4g1365 645 Pfam Protein kinase domain 304 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1365 Lan-Chr4 22605992 22611352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1365 31 645 Receptor kinase-like Gene Family AT4G02010 70.550 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan4g1365 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1365 - - gmx:100792818 994.571