Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1349 ATGGATGATTGTTGCGCTGTTTGTGCTGAACCTTTGGAATGGGTTTCGTACGGACCCTGCTTCCACCGCGACGTTTGCTCCACCTGCGTCTCTCGCCTCCGTTTCATTTGCCACGACCGCCGTTGCTGCATTTGCAAGACTCCCTCCGACGTCGTTTTCGTCACCAAGGCTCTAGGAGATTATACAAGGATGATTAATGACTTCTCATCCCTGCCATCTGATGTAAGGGAGGGTCGGGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTCTCGTGCAGTGAATGTGACAAGTTGGAGGACCAACCACACGATCCCTCAAAGCGTAGAGGGATGATGTTGAGGAATATAGAACAGCTGAAGGGTCATTTATTCCACCGCCATAGATTGGTTATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTATTTATATGTGAACAAAAACTATTTACTAGATCACAGTTGAACCAACACATTTGCACGGGTGATTCTGAGGTGGATGGAAGTGAGAGTGACAGAGGTGGCTTTATGGGCCATCCCATGTGTGAATTTTGCCGAACACCATTTTATGGGGACAATGAACTATACACGCATATGTCTACGGAGCATTATACTTGCCACATATGCCAGCGCCGGCATCCAGGACAATATGAATACTACAAGAATTATGATGACCTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTATTGTCTTTCAATCTGAACAAGAAATGAAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCACAGCGTAATGCTGCTCTTCAAATACCAACTAGCTTTCGTTACCGACATGGTAATGAGCAGGACCGACGCCATGGAAGAGGTCGTAATTTTCACCGTGATTTTTCCGAAAGTCAACTCTCTATGGCCATTGAAGCCAGTTTGGAGGCAGCAAATGCAGAGCACATGTTTCATGATCCACCAACATCAGATACTGGACAAGTTGATGTTCATAATGGGAATGCTAATATTGATTCTGTTCAGCCACTGGAATCATCAGCATCATCAAGATATCTACAAGTGTTGGGGCAGAACTCTTCGGGCGCACCTTTGGAAAATTCATCCTTTCCTCCACTTCCCAAAGCTTCCAGAAAAGGCAAGCAGAAGTCCAAACATGGGTCAGAAGCTTCATCTAGTAACTCCATGGCTGCACATCTGCGCCGACATAGGAATGTTTCTGTTATTAGTTCTGGTAATGCTTGGCCAGCTGCAAGTCGTGGACCTGCACAACCTTTAAGTAATCCTACACTATCTAGACTGTCAACAAATACTGCTCCTGGAGTGTCACGTAATTCTGGCAAGGCCGTCATTAACAGTGCACCTGCACCATCAACTTATGCTAGTTCCGTTCAGCCTATGCAGAGAACTGCTCGAGAGACGCATGATAATGGTGGAATTGTTCACTCAGCTTCTGCTCCAAATATCATTCAGAGCAGTCCTGTGGGACCTTCAATTTCTGATTTTCCTCCAGTATCTGCTGCAAAAGTGAGAACGTTAGCGGCAAGCAGCCGACCGTTGTTGAATGCAAAGGATGTTCGCCAGAGCAGTCTCGTGGCACCTTCAATTTCTGATTTTCCTCCTGTATCTGCTACACAGGTGAGGAAGTTAGCAACAAGCAGCCAATCTTCGTTGAATGCAGAGCATGTTCACACTGCTAACAAGTTGTTGATTGAAAAGATTCGCAGCACTCTTGATTTTGATGAAGATAGATACTCATTATTTAAAGATTTTTCTGCACAATATCGCCAAGGAATAATAGACACACCTACATATCTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACATGAGTTGGCCCGGCTCTGCCCAGATGTTCAGAAGCAGAAAGAGCTTGTTGAGTGTTACAATGCTAGTTTGCAAAAAAATGTTATACTAGAAAATGGTTCAAGTCATACTAGCACCCATCGTAAAAATGGTAATATCTCCCAGAAAAGTAAAGGTAAGTCTGTTGACGCAGGTGTTAGTAATCCCAAAGAGAGATTAGCAGATAGTTTTTTGAACACTGTTCGCCAACTGCAACTGAACAATAACCCTTCGGAAGCGAATGTGGAGGTGCTATCAAGGGGTGATTACCGTACTGACAAAGGCAAGTCAAAAATCGAGAGTTCTGGGGGTCAATCCATGGTGAAACTTGGTGGGCAGAGTGAGAAATTAAGTGGCAGTATATCGAATCAAAATAGTGAGGATAAGGGTGGTAAAAACAAGCAGCGCAAGAAAACTTCCAAGTTCCTTAGATCCCGCCTTGGTGATGCTTCTGCTGAATCAAATTTAGATGTTGAAAATTCACAGACTGATTCAGATCCAAAAACCACAAATGGCTTAAACAGTTACAAGAATGGCCCTGGGAGTATGCCTGCACGTGGTGTTTGGAGTAACAGTGGAGGCAAAAAACTCTTTTCCTAA 2550 0.4427 MDDCCAVCAEPLEWVSYGPCFHRDVCSTCVSRLRFICHDRRCCICKTPSDVVFVTKALGDYTRMINDFSSLPSDVREGRVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSECDKLEDQPHDPSKRRGMMLRNIEQLKGHLFHRHRLVMCSLCLEGRKVFICEQKLFTRSQLNQHICTGDSEVDGSESDRGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRRHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFIVFQSEQEMKRHNAVEHGGRMSRSQRNAALQIPTSFRYRHGNEQDRRHGRGRNFHRDFSESQLSMAIEASLEAANAEHMFHDPPTSDTGQVDVHNGNANIDSVQPLESSASSRYLQVLGQNSSGAPLENSSFPPLPKASRKGKQKSKHGSEASSSNSMAAHLRRHRNVSVISSGNAWPAASRGPAQPLSNPTLSRLSTNTAPGVSRNSGKAVINSAPAPSTYASSVQPMQRTARETHDNGGIVHSASAPNIIQSSPVGPSISDFPPVSAAKVRTLAASSRPLLNAKDVRQSSLVAPSISDFPPVSATQVRKLATSSQSSLNAEHVHTANKLLIEKIRSTLDFDEDRYSLFKDFSAQYRQGIIDTPTYLDYVQQFGLSHLVHELARLCPDVQKQKELVECYNASLQKNVILENGSSHTSTHRKNGNISQKSKGKSVDAGVSNPKERLADSFLNTVRQLQLNNNPSEANVEVLSRGDYRTDKGKSKIESSGGQSMVKLGGQSEKLSGSISNQNSEDKGGKNKQRKKTSKFLRSRLGDASAESNLDVENSQTDSDPKTTNGLNSYKNGPGSMPARGVWSNSGGKKLFS* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1349 849 MobiDBLite consensus disorder prediction 438 491 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 749 778 - -
Lan4g1349 849 PANTHER EBR1 553 848 - -
Lan4g1349 849 PANTHER EBR1 1 555 - -
Lan4g1349 849 CDD RING-HC_ZNF598 5 46 IPR041888 -
Lan4g1349 849 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lan4g1349 849 MobiDBLite consensus disorder prediction 675 705 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 804 828 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 729 849 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 343 371 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 385 424 - -
Lan4g1349 849 MobiDBLite consensus disorder prediction 352 371 - -
Lan4g1349 849 PANTHER ZINC FINGER PROTEIN 598 553 848 IPR044288 GO:0061630|GO:0072344
Lan4g1349 849 PANTHER ZINC FINGER PROTEIN 598 1 555 IPR044288 GO:0061630|GO:0072344
Lan4g1349 849 MobiDBLite consensus disorder prediction 449 491 - -
Lan4g1349 849 SMART c2h2final6 221 251 IPR013087 -
Lan4g1349 849 SMART c2h2final6 197 220 IPR013087 -
Lan4g1349 849 SMART c2h2final6 108 145 IPR013087 -
Lan4g1349 849 SMART c2h2final6 252 281 IPR013087 -
Lan4g1349 849 MobiDBLite consensus disorder prediction 675 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1349 Lan-Chr4 22400214 22404639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1349 1 849 C2H2 Transcription Factor Family AT3G62240 50.057 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1349 K22381 - gmx:100799878 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1349 4 22400214 22404639 Lan4g1349 4 22400214 22404639 ECH