Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1346 ATGAAAGGAAAAATAATTGTCTCTGCTGTTTCCCTCATCCTTGTGGTAGGTGTTGTGATAGGTGCAGTTGTTATCAATCACAATAACAGCACCACAAGCACTGATGTTAAGGCTAATGTGAAGGCTGCTGATAAGATTTGTCAAAGTGCAGAACAAAAAGACCTTTGTGTTCAAACCCTAGGCACCGTGAAGGACAACTCAGACCCTAAAGAATATGTAGCAGCAGTTTTGAAAGCAAGCACTGAGAGTGTCATCAAGGCCTTCAACATGAGTGACCGGCTCATAGTGGAACATGGAAACAAGGGCCAAGGTGTCAAGATGGCCCTTGATGATTGCAAGGACTTGTTGGAATCTGCATTGGACAGTCTTCAGCTCTCAACTGACATGGTTGGTGGAAGTGACGTTAAACAAGTGCATGACCAAACCGCTGATTTCAGGAATTGGTTAACTGCTGTTATCTCATACCAACAAGCTTGTTTGGAAGGTTTTGATGATGGCAACGAGGGTGAAAAAGCAGTGAAGGAACTATTCAAAAGTGATAGTTTGGACCATATTGGTAAAATCACCGGTGTTGCACTTGACCTTGTGTCTGATTTATCAAACATCCTTCAACAATTCGGTTTGCAGTTGGATTTGAAACCTTCCTCTCGCCGCCTTCTCGGAGCGGAGGAGATCGACGAAGAAGGACTCCCCACATGGTTGTCCGCCTCCGATCGCAAACTCTTGGCTAAGGTAGGCAAAAAGAAGGGTGGTAAGGGTAAAGGTAAGGGTAAGGGTAAGGGTAAGGGTAAGGGTGGTAAGGCTGCTGCCGGAGCTGCTGCCGGAGCTGCTGCCAGTGCTGCTGCTGGTGCCGGTGCTTCTGGTGCTGCTGGCGCTGCAGGACCAGGTGCAAGAACCGTTGTGGTGGCTAAGGATGGTAGTGGCCAATTTAGAACCGTTAAGGAAGCTATTGATGCTTACCCTAAGGACTTGCAAGGAAGATATGTTATCAATGTTAAGGCTGGGGTGTATGATGAGTACATCACTGTTCCTAAGTTTGCAGCAAATATTCTTATGGTTGGTGATGGCCCTTTGAAGACCATTATCACTGGTAGAAAGAACTTTGCTCTTGCTGGTATCAAAACCATGATGACTGCCACATTCGCCAACACTGCACCTGGATTCATTGCCAAGGGAATTAAATTCGAGAACACTGCTGGTATAGAAGGACACCAAGCTGTTGCACTCAGAAACCAAGGAGATATGTCAGCCTTCTTCGATTGCCACATAGTTGGTTATCAAGATAGTTTGTATGTCCAAACCAATCGTCAATTCTACCGTAACTGCGAAATCTCCGGCACCATCGACTTCATCTTTGGAACATCAGCAACCTTGATCCAAAACTCAAGAATCATAGTAAGAAAGCCCAAAGCAAGTCAATTCAACACAATCACTGCCGATGGCACTGAACACAGGACCATGAATTCAGGAATTGTTCTTCAGGGTTGTGATATTGTAGCAGAAGCTGGTCTTGTCCCAGCACAAAACCCTTCATACTTTGGTAGACCATGGAAGGCTTATTCCACTGCAGTGATTATGGAATCAAATATCGATGGGTGTATTCACCCAGAGGGGTGGAAAGAATGGGAAGGTGCACCAGGAGGTTTCACTGGTACCCTTTACTTTGTTGAATATGCTAACACTGGACCTGGTTCAAACGTTGCTGGAAGAGTAAAATGGAACACTTTGCATACAAGAGTTAGTCCTCAAGAAGCTGCAAAATACACTGCAGCACAGTTTCTTGCAGCAGGACCTACTAGCAAAGCTGAAGATTGGTTGAAAACTACTGGTGTTCCATTTACCCTTGGATTTTCCAAGTGA 1860 0.4527 MKGKIIVSAVSLILVVGVVIGAVVINHNNSTTSTDVKANVKAADKICQSAEQKDLCVQTLGTVKDNSDPKEYVAAVLKASTESVIKAFNMSDRLIVEHGNKGQGVKMALDDCKDLLESALDSLQLSTDMVGGSDVKQVHDQTADFRNWLTAVISYQQACLEGFDDGNEGEKAVKELFKSDSLDHIGKITGVALDLVSDLSNILQQFGLQLDLKPSSRRLLGAEEIDEEGLPTWLSASDRKLLAKVGKKKGGKGKGKGKGKGKGKGGKAAAGAAAGAAASAAAGAGASGAAGAAGPGARTVVVAKDGSGQFRTVKEAIDAYPKDLQGRYVINVKAGVYDEYITVPKFAANILMVGDGPLKTIITGRKNFALAGIKTMMTATFANTAPGFIAKGIKFENTAGIEGHQAVALRNQGDMSAFFDCHIVGYQDSLYVQTNRQFYRNCEISGTIDFIFGTSATLIQNSRIIVRKPKASQFNTITADGTEHRTMNSGIVLQGCDIVAEAGLVPAQNPSYFGRPWKAYSTAVIMESNIDGCIHPEGWKEWEGAPGGFTGTLYFVEYANTGPGSNVAGRVKWNTLHTRVSPQEAAKYTAAQFLAAGPTSKAEDWLKTTGVPFTLGFSK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1346 619 ProSitePatterns Pectinesterase signature 2. 444 453 IPR033131 -
Lan4g1346 619 MobiDBLite consensus disorder prediction 246 265 - -
Lan4g1346 619 SMART PMEI_2 38 195 IPR006501 GO:0004857
Lan4g1346 619 CDD PMEI-like_3 46 201 - -
Lan4g1346 619 SUPERFAMILY Pectin lyase-like 297 616 IPR011050 -
Lan4g1346 619 Pfam Pectinesterase 300 595 IPR000070 GO:0030599|GO:0042545
Lan4g1346 619 Gene3D - 296 617 IPR012334 -
Lan4g1346 619 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 201 IPR035513 -
Lan4g1346 619 PANTHER PECTINESTERASE 286 617 - -
Lan4g1346 619 PANTHER PECTINESTERASE 3 247 - -
Lan4g1346 619 PANTHER PECTINESTERASE 3 247 - -
Lan4g1346 619 PANTHER PECTINESTERASE 286 617 - -
Lan4g1346 619 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 199 IPR035513 -
Lan4g1346 619 MobiDBLite consensus disorder prediction 246 263 - -
Lan4g1346 619 Pfam Plant invertase/pectin methylesterase inhibitor 44 193 IPR006501 GO:0004857
Lan4g1346 619 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1346 Lan-Chr4 22361985 22364847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1346 2 617 Carbohydrate Esterase AT5G49180 34.928 3.22e-126 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0946 16 16537499 16559307 Lan4g1346 4 22361985 22364847 PCT