Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1340 ATGGGTAATGGTACTTCTCGTGTTGTTGGTTGTTTGGTTCCATTTAATGGCAAAGGTGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGGTTAGGCCATTCCTTCTGTTATGTGAGGCCATCCATTTTTGAATCTCCTGCCATTACCCCATCGAATTCTGAGAGGTATACACTTGATTCAAGTACCCTTGATTCCGAAACGTTGAGTGGATCCTTTAGGCATGATAGCATGGAACACTCTTCTGGCCTACACAAGCTGGGCAAGAATTGTCCGGAAACTACATTTAAGACAATTTCTGGGGCTTCGGTCAGTGCCAATGTTTCAACTGCAAGAACAGGTAACCAGAGTGCATTGTTTGCCAGTGATGCCCTGGAACCTGCTGCATCGTTTGAGGGAACTGCCTCGTTTGCTGCAATCCCATTGCAGCCTGTTCCCCGTGGTTCTGGACCTTTGAATGGTTTCATGTCTGGACCCTTGGAGAGAGGTTTTGCCTCAGGTCCATTGGATAAGGGCGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGATAATCATAAATCCAACTTTTCAGCGCCTCTTGCACGTGGTCGTCGGAGGCCTCGTCTCCAGAATCTTATGAGAAGTGTAAGCGGGCCAATGAAGAACACCTTTTCTCGGACCTTCTCTAAGCATTCCGCAGGTGGAGGTTGGATGCAACGGTTATTGTTTCACCCAGTGACCCAACTAGCTTGGCATTCCAAAGAGACGAAGTTTCGATCAGAAGTTGCTAGAAACTGTGTTGAAGTTGGGTCATCTGAGATGGAGTATAGAAATACACATAATTTGCAGTGGGCTCAGGGCAAGGCCGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCCATCTATACAGATTTATAGACAAGGAATTGGAAGGGTTACTTTGGGATTATGAAGATAATCCTGTAGAACCTATGCCCGCTCCAGTAAGCAGTAGGGAGGAACATTCTGATACTCATTCTAATTCAAATCAAGGAATTTTAGAATCTTCTTCTGGTTCAGTAATGATCAAGGATCAATCATCTAACAGTGAGATAGTTGAGGAAAATGCTGAAAACCGGTTACCTAACTGTGGAAGCTCTAGTATCTCGTGTACTATTCCAACTTCTGTTCCACCACTTGGACAATTGCCTAGTAAAGGTAGAAAAAGTGTCCGTCTTTATGAGCTACTTCAGATGGAGTCATGGGATGAGCAGGGTCTTTTTTCGGTCTCAGAACAAGGTAAGGATTCTTCTGTTCCTAGGGAATCAACACTAGAGGAGAGTGTGAGACCAAGCTCATCTAATTTAAACGAAGAAAGTTCCAAAGATCAGGATGAAGATCCCTCTACATCAGGAAAAAACGGAGGCATTAGGTTTGGAGCATCTAACCAGGAGCCGGTGAGTGCCTTTTCTGTTTCAGGACAACGACAGAATTCAAGGAAGTCATTTATCAGTTCAAAAATCAGAAAAATGTACAGGAAGCCAAAGGCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGGATAGGGACGAAACTTTTGTTGATGAGAAACTAGTGGAAGCCTCGGGTCCCATTAGAAAATGCAAGTCTGGAGTCGATCATAATGCAGTTTTAAGAGCAATGGAACGAGCCCTTGAGAGAACAGAAGAGGCATACATGGAAATGGTGGAGAATAATCTGGACAGGAATCCAGAGCTTGCTTTAATGGGGTCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTTGTGTGATTTTGGCTCAAGAAAGACCGAATGATCGTCATCCTAATCCAAGTTTTGTCAAGGATGATGCAAGGCATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTGGATCGGATTTCGGAGGAGTCCCCAATTCACAATCAAAACAGTCATGTTAATAGGATGAACAAAAACAGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCATAGCACAAATACTGAAGAGGAAGTTTTTAGGATAAAAGCAGAACATCCTGATGATAATCAAGCCATATTAAATGATCGAGTGAAAGGACAATTAAAAGTCAGCAGAGCATTTGGTGCCGGGTTCTTGAAGAGGCTGTCTTTTAACGAAGCCCTGCTGGAGATGTTTCAAGTTGATTATGTGGGAACCGCTCCTTACCTAAGTTGCACACCTTCTGTTCTGCATCACCGACTTTCCTCAAGTGATCGGTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCCGAAGGTGACCCTGCACAGTACCTTATTGCAGAGCTTCTCCTCCGTGCTGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGAGAGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGGAGGATTTGGAGATCCTCAGGATAA 2646 0.4335 MGNGTSRVVGCLVPFNGKGGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERYTLDSSTLDSETLSGSFRHDSMEHSSGLHKLGKNCPETTFKTISGASVSANVSTARTGNQSALFASDALEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPIEKGVMSGPLDDNHKSNFSAPLARGRRRPRLQNLMRSVSGPMKNTFSRTFSKHSAGGGWMQRLLFHPVTQLAWHSKETKFRSEVARNCVEVGSSEMEYRNTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDNPVEPMPAPVSSREEHSDTHSNSNQGILESSSGSVMIKDQSSNSEIVEENAENRLPNCGSSSISCTIPTSVPPLGQLPSKGRKSVRLYELLQMESWDEQGLFSVSEQGKDSSVPRESTLEESVRPSSSNLNEESSKDQDEDPSTSGKNGGIRFGASNQEPVSAFSVSGQRQNSRKSFISSKIRKMYRKPKALCKKLFPWSYDWDRDETFVDEKLVEASGPIRKCKSGVDHNAVLRAMERALERTEEAYMEMVENNLDRNPELALMGSCVLVMLMKDQDVYVMNLGDSCVILAQERPNDRHPNPSFVKDDARHKNRSRESLVRMELDRISEESPIHNQNSHVNRMNKNREISMCRLKMRAVQLSTDHSTNTEEEVFRIKAEHPDDNQAILNDRVKGQLKVSRAFGAGFLKRLSFNEALLEMFQVDYVGTAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGERRKYHDDVSVMVVSLEGRIWRSSG* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1340 881 MobiDBLite consensus disorder prediction 645 662 - -
Lan4g1340 881 ProSiteProfiles PPM-type phosphatase domain profile. 277 872 IPR001932 -
Lan4g1340 881 PANTHER PROTEIN PHOSPHATASE 2C 11 881 IPR015655 GO:0004722|GO:0006470
Lan4g1340 881 Pfam Protein phosphatase 2C 697 844 IPR001932 -
Lan4g1340 881 MobiDBLite consensus disorder prediction 350 393 - -
Lan4g1340 881 SMART PP2C_4 277 870 IPR001932 -
Lan4g1340 881 Gene3D - 431 878 IPR036457 -
Lan4g1340 881 Gene3D - 251 415 IPR036457 -
Lan4g1340 881 MobiDBLite consensus disorder prediction 366 393 - -
Lan4g1340 881 MobiDBLite consensus disorder prediction 448 513 - -
Lan4g1340 881 MobiDBLite consensus disorder prediction 448 477 - -
Lan4g1340 881 MobiDBLite consensus disorder prediction 640 662 - -
Lan4g1340 881 CDD PP2Cc 578 872 IPR001932 -
Lan4g1340 881 PANTHER PROTEIN PHOSPHATASE 2C 32 11 881 - -
Lan4g1340 881 Coils Coil 579 599 - -
Lan4g1340 881 SUPERFAMILY PP2C-like 289 873 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1340 Lan-Chr4 22256092 22263025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1340 1 881 PP2C-type Phosphatase Gene Family AT2G46920 64.759 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1340 - - cam:101510249 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1340 4 22256092 22263025 Lan4g1340 4 22256092 22263025 ECH