Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1328 ATGGGCGGAGGAGGAGCGGCGATGTCGTACGCGGAGGCGCAATATACATCGGCGAAGACATCAGTGTGGTGGGATATAGAGAATTGTCAAGTTCCTAAAGATTGTGATCCTCATGCTATTGCTCAGAACATAAGTTCCGCTCTTGTTCATTTGAAATATTGTGGTCCCGTTTCTATCTCCGCTTACGGCGACACCACTCGCATCACTTCCACCGTTCAACAAGCACTTTCCAGTACCGGAATCTCGCTCAATCATGTCCCCGCCGGAGTTAAAGATGCCAGCGACAAGAAGATTCTTGTCGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCAGGGGACCGAGACTTCTCCAACGCTCTTCATCAATTGCGGATGAGGAGATATAATATCCTCCTTGCACAACCCCAGAAAGCATCAGCACCCCTAGTCGCAGCCGCAAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAAAACCTCCTCTCACTGATAGTGAATCACAACAATTTGGTAATAACAGCTTCCAATCATCTTCAGACACCTTACCAATTCCAGTATCCAATTCCGCTCAGATACCACAGCATGTGAACTCCTATTCAGATGTTAATACAGGAAATCCGAAATTTCCAAATACAGGAAGGGGCTTTGATTCTAGACAGCAGGGGAAAGCAACTTGGAGAGGTCCAAGTAAACCAAATGGACCCAGAGCCATGAATCCTTCTACTGTTGGGGTTCAAGAAAGTCGTAGCAATATGAACTCTTTTCGACCTGGCAACTATAACCCAAATATTTCCTCAAGTGTGTCTGCTCAAAATCTTATGCATGGCAATTCTGATAAATCATGGAGCAATAACAGTAATCAACAGGGCAATCATCAAAATCCACATTCACAGCCATTAAGATCTAACAGTTTTCCTTCGCAACCTCCTTTTGCTCCAACTACTTCATATTCTCCACACCCCCCTTCGCAACCTCTTTTTCTGAATCCTCCTTCGCAACCTTATTTTGCTCCAACTACTTCATATCCTCCAAATCCCCAAAACTTTGCAACGCCAGTAGTGCCACCTAGGGCAGGTGGACCCAGCTTCTCTGCACGGCCGCTTACCAATGTGGTGGATATTGGCAATCTGAATATTTCTGCGCATCCCAGTAGTACTCATGATCTTCGCCCCGTTAAGCAATGGAGTGGAGAGTTGAAACAGAGTTCCAGCAGTAGTTCCCCACGTCCTGTAAGACCATTTGACAAACAAAATGGACATATGGTGCATAGCACACAACAGTCATACAACGGCTATCCACAGCGTCCTGAATATCGACCTAAATCATTGGCACCTATGGGTGACAAAAATGTTCCTGCTAATGGTGTATGGGGACCTGAAGGATACCCTAAACCTTCTGAGTACGTACAAGGTCTTATAGGAGTAGTTTTACTTGCCTTGAATACACTAAAAACTGAAAAAATCATGCCAACTGAGTCAAATCTAGCAGACTGCATTCGTTATGGTGATCCCAAACACCGCAACACTGACGTTAAGAAGGCTCTAGAGCATGCTATTGAGCAGCAGATGGTGGTGAAGCAGAACTTAGGTGCTTTGCAGTTATATGTTGGTAAGAATGATAAAGTTTGGAAGTGTGTGAACCCTATAGGTGGTAATCCTAAACAGCATTCTCAAGAAATATGGGATGAGATTCAAAAATATATATCAACTCCTTCTGGAAGATCAGCAATAATGGGTACTCAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTAAAAGATCATGTCTTGGGTGATGTCCTACAGATTTTGAACATGGTGATCACCCATAAAAAATGGATTGTGCATCATCAATCGGGATGGCAACCACTTAATGTTACTCTAGCTGAGATCAATTCTGATCTCGGGGCCATAGCTGGCCCATAA 1959 0.4416 MGGGGAAMSYAEAQYTSAKTSVWWDIENCQVPKDCDPHAIAQNISSALVHLKYCGPVSISAYGDTTRITSTVQQALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGKPPLTDSESQQFGNNSFQSSSDTLPIPVSNSAQIPQHVNSYSDVNTGNPKFPNTGRGFDSRQQGKATWRGPSKPNGPRAMNPSTVGVQESRSNMNSFRPGNYNPNISSSVSAQNLMHGNSDKSWSNNSNQQGNHQNPHSQPLRSNSFPSQPPFAPTTSYSPHPPSQPLFLNPPSQPYFAPTTSYPPNPQNFATPVVPPRAGGPSFSARPLTNVVDIGNLNISAHPSSTHDLRPVKQWSGELKQSSSSSSPRPVRPFDKQNGHMVHSTQQSYNGYPQRPEYRPKSLAPMGDKNVPANGVWGPEGYPKPSEYVQGLIGVVLLALNTLKTEKIMPTESNLADCIRYGDPKHRNTDVKKALEHAIEQQMVVKQNLGALQLYVGKNDKVWKCVNPIGGNPKQHSQEIWDEIQKYISTPSGRSAIMGTQCKYEAGIVIKNMCLKDHVLGDVLQILNMVITHKKWIVHHQSGWQPLNVTLAEINSDLGAIAGP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1328 652 MobiDBLite consensus disorder prediction 388 420 - -
Lan4g1328 652 MobiDBLite consensus disorder prediction 388 425 - -
Lan4g1328 652 MobiDBLite consensus disorder prediction 320 349 - -
Lan4g1328 652 Pfam NYN domain 19 155 IPR021139 GO:0004540
Lan4g1328 652 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 333 - -
Lan4g1328 652 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 336 637 - -
Lan4g1328 652 MobiDBLite consensus disorder prediction 243 319 - -
Lan4g1328 652 Gene3D - 11 162 - -
Lan4g1328 652 CDD PIN_limkain_b1_N_like 19 143 - -
Lan4g1328 652 MobiDBLite consensus disorder prediction 171 369 - -
Lan4g1328 652 Pfam OST-HTH Associated domain 589 644 IPR025677 -
Lan4g1328 652 MobiDBLite consensus disorder prediction 171 235 - -
Lan4g1328 652 PANTHER LIMKAIN B LKAP 336 637 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lan4g1328 652 PANTHER LIMKAIN B LKAP 2 333 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1328 Lan-Chr4 22097999 22101964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1328 8 256 C2H2 Transcription Factor Family AT5G61190 59.761 1.22e-83 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1328 - - lang:109346239 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1328 4 22097999 22101964 Lan4g1328 4 22097999 22101964 ECH