Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1321 ATGGGCATTAATGGGAAGAATTCAGATGTAACGGTTGAGATTAAAGATCTGAAATTCACGTACCCAGGTATCGACGGCCATCCTCCTCCGGGTTCAACTCCTCTCATTCAAGATTTCTCCCTAACCCTTCATTCTTCTGATCGTTGCCTTCTCGTTGGATCCAATGGCGCTGGGAAGACAACGATTCTGAAGATATTAGGAGGGAAACACATGGTTGATCCAGATATGGTTCGTGTGCTTGGTAGATCAGCTTTTCATGACACCAATTTAATTTCTTCTGGTGATCTTTGTTATCTCGGTGGCGAGTGGAGGCGAGATGTTGCTTTCGCAGGATTCGAGGTTCCAATACAAATGGATGTTTCTGCAGAAAAAATGATATTTGGAGTAGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTTATCAAGGTATTAGATATCAATCTTTCCTGGAGATTGCATAAAGTGTCTGATGGTCAGAGAAGAAGAGTGCAAATCTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTCGACGAGATAACAGTTGATCTCGATGTTCTAGCAAGAGCTGACCTTCTGAGGTTTCTGAAAAAGGAATGTGAAGAGAGGGGTGCCACTATTATCTATGCAACTCATATATTTGACGGTCTGGAGGATTGGCCAACAAACATAGTTTATGTAGCCCATGGAAAGCTGCAACTAGCATTGCCTATGGACAAAGTAAAAGAAACTAGCAAATTGTCACTAATGAGAACAGTTGAAAGTTGGCTGAGGAAAGAACGAGACGAAGATAGAAGGAAAAGGAAAGAGAGGAAGGCAGCCGGTGTTCCTGAATTTGTGAAACCAGTAGACGGAAGCCGAGTAATTAATAATGGCTGGGCAGCTGGACGGCTAAATTCCACCATTGCCGGTGAGGAAAACTTTGTTCTAAGCTCAAACAGAGTATTGAGGCAGTAG 960 0.4323 MGINGKNSDVTVEIKDLKFTYPGIDGHPPPGSTPLIQDFSLTLHSSDRCLLVGSNGAGKTTILKILGGKHMVDPDMVRVLGRSAFHDTNLISSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVAGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLKKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLALPMDKVKETSKLSLMRTVESWLRKERDEDRRKRKERKAAGVPEFVKPVDGSRVINNGWAAGRLNSTIAGEENFVLSSNRVLRQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1321 319 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 9 318 - -
Lan4g1321 319 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 9 318 - -
Lan4g1321 319 Pfam ABC transporter 37 182 IPR003439 GO:0005524
Lan4g1321 319 Gene3D - 7 279 IPR027417 -
Lan4g1321 319 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 12 255 IPR003439 GO:0005524
Lan4g1321 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 249 IPR027417 -
Lan4g1321 319 SMART AAA_5 45 232 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1321 Lan-Chr4 22033276 22036748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1321 12 209 Calmodulin-binding Proteins AT2G36910 24.651 1.50e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1321 K12608 - gmx:100782386 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1321 4 22033276 22036748 Lan4g1321 4 22033276 22036748 ECH
Lan20g0998 20 10706664 10709628 Lan4g1321 4 22033276 22036748 LSH