Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1319 ATGGCTCCCAAATCCAAAGCTGCAAAAACCTCTTCCACTTCTTCCCCAGCCACAGCGCCCTTCAAGGCGGGCTTTGCCGTCGAGGTCAACTCCGACGACGACGGTTTCCGTGGTTCTTGGTTTACCGGCAAGATCATTCGCCGCCTCGTCAATGACCGGTTCGTGGTCGAATATGACAACCTCATGGCCGACGAGAGCGGTTCGAAGCGGTTGAGAGAGATTCTCAAACTCCACCAGCTCCGGCCAATTCCGCCGGTGGAGGCTGGCCGGGAATTCAAGTTCGGCGATGAGGTGGATGCGTACCACAATGACGGGTGGTGGGAGGGTCACGTTACTGAAGAGTGTGGGAATGGAAGGTTCGCGGTTTATTTCAGAGTTTCGAGGGAGCAGATCGTGTTCCAGAAAGAAGAACTCAGACTCCACCGTGAGTGGTTCGATGAGAATTGGGTTCCTCCATTCGAAAACCAACAGCATCAGCAGCAAGAACAAGAGAAAGTGTTGTTGGCACCAAATGTGAAGTCTGCTGAAACTGTGATGCCAGATATGAAGTCTGCTCAAATTGTGACACTAGATGTGAAGTCTGCTCAAACTGTGACACTAAATGTGAAGTCTGATGAAATTGTGAATGAGGAGGAGAGGTTTAGAGTCGGGACACCAGTTGAGGTTAGCAGTGACGAAGAAGGTTGCCAGGGAGCTTGGTTTTCTGCCACTGTTATTCAAGTGATAAGAAAGGGAAAGTTCCTTGTTGAGTACCAGAGCCTACTGGCTAATGATGATTCCCAGCTTTTAAGAAAGGAGGTTGATACCCACCACATAAGGCCTCATCTGCCACAAACTGTTGTTAATGGTCACTTTAGTCTTCTTGAAGAGGTTGATGCTTTTCACAACAATGTCTGGTGGATTGGCACGGTTTCTAAAGTTCTTGACAACTCAAGGTATGTTATTTACTTCCGGAACAGAAGTGAAGAACTAGAGTTTCAGCACTCCAAGTTGAGGAAACACCAGGACTGGATTGATGGCAAATGGATCATGCCTTCGAAGGTGTTGGAGTCCTGA 1056 0.4858 MAPKSKAAKTSSTSSPATAPFKAGFAVEVNSDDDGFRGSWFTGKIIRRLVNDRFVVEYDNLMADESGSKRLREILKLHQLRPIPPVEAGREFKFGDEVDAYHNDGWWEGHVTEECGNGRFAVYFRVSREQIVFQKEELRLHREWFDENWVPPFENQQHQQQEQEKVLLAPNVKSAETVMPDMKSAQIVTLDVKSAQTVTLNVKSDEIVNEEERFRVGTPVEVSSDEEGCQGAWFSATVIQVIRKGKFLVEYQSLLANDDSQLLRKEVDTHHIRPHLPQTVVNGHFSLLEEVDAFHNNVWWIGTVSKVLDNSRYVIYFRNRSEELEFQHSKLRKHQDWIDGKWIMPSKVLES* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1319 351 Gene3D - 202 285 - -
Lan4g1319 351 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 65 - -
Lan4g1319 351 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 21 348 - -
Lan4g1319 351 Pfam Agenet domain 26 85 IPR008395 -
Lan4g1319 351 Pfam Agenet domain 217 277 IPR008395 -
Lan4g1319 351 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 21 348 - -
Lan4g1319 351 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 10 65 - -
Lan4g1319 351 SMART agenet_At_2 283 339 IPR014002 -
Lan4g1319 351 SMART agenet_At_2 19 88 IPR014002 -
Lan4g1319 351 SMART agenet_At_2 90 146 IPR014002 -
Lan4g1319 351 SMART agenet_At_2 212 280 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1319 Lan-Chr4 21998273 22003825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1319 23 144 PHD Transcription Factor Family AT5G58610 25.874 1.53e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1319 - - lang:109346228 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1319 4 21998273 22003825 Lan4g1319 4 21998273 22003825 ECH
Lan8g0357 8 5711618 5714815 Lan4g1319 4 21998273 22003825 LSH
Lan20g0608 20 4806552 4808698 Lan4g1319 4 21998273 22003825 LSH