Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1296 ATGGCACCCGCGAGGAAATCAAGAAGTGTTAATAAGCGATTTTCAGCTTCAAATGAGGTTTCTCCTGACAATGATGGAGTTAACTCAATTAAAAACAAGCTACGGAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAACAATTTTATCAAGCATACAGGAAGTATGATAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAACAGATCCATCGAAATGGTGGAAGCTCTTTACAATATGAATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCTATGATGACAGATCACTACAATGTGCTGGTTGGGAGTGATAGTGAAAGGGAGAGCAATGATTCACCAGGATCTCGAAAACCTTTGAAACGAAAGATTGAAAAAGTTCAGCTTAGTGTCTCAAAAGATTCTGTTCAGTCTCAGTCAATTGCTTCCAGTGACGGTTGCCTCTCTCTATTGAAGAAGAGACGCTTTGATGGTATCCAGCCTCGAGCTGTTGGGAAAAGGACACCTCGCGTCCCAGTTCACTACTCCTTCAAGAAAGATGATAGGGAAAACTATGTTTCGCCCAATAAAAGAAGCCTGGGGTCAACTGTTGCTGCTAATGATGATGAAATTGCACATGTAGCAGCTTTGGCGTTAGCTGAGGCGGCACAAAGGGGCGGCTCTCCCCAAGTTTCCCAAACACCGCACATAAGAGCAGAGCATAAGTCCCCTCATGTTCAGAACTTGGGGAAAATGTGCCAAACGTTGGAGACAGCTTCTGCCAAGTTTCATCATGCTTCTGTGGATGAAGAGTTCTTGGAAGGTAGCATGGAAAGCAGGGGAGCTGAAAATGGAGAATATGTGAGAGATTCTAGTTCCTTAATGGATATGGAAGGCAAAGACTCTTTCGTTCTTCAGAAGGGAAAAATGATTTACAGAAAGAAAGAGAGAGTGGTAAACATTGGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGCGGCACTGAAGAAGGGGTCAGTTTTAGTTCTTTGAAAGAAAAGGTTGATATTGAGGTTAATAATGCAAAACTTGAGCAATCCTCTCTAAAAAGTAAGAGGAAAAGAAGCAAGAAACTCTTTTTTGGAGATGAAATCCCTGCCTTGGATGCTTTGCAAACCTTGGCTGATGTCTCTCTCATGATGCCAGCATCTATGGTAGAATCAGAATTGTCTGGCCAGGTGAAGGGAGACATAGTGACTGTTGATAAAGGTGATAAATCTGCTTTACCTGAAGCTGCATCAACAAGCCATACCAGAGATAAAATAAAACTCTCAGGTTCAAAACAAAAGGTTGTTCACGTGGTCTCTGGAATTGAGGTTTCAACCCCCACAAAACCTAAACTTGGAAAGGAATCGGCAAATGATGCTAAAGCTCTCTATGAATCAAAAGAGCAACTTTCACCTGCTGATAGAACATGGAAAAGAAAGCGAAATTCTGTGGTTTCTAAGGTTGCGAGTACAAAGCTTAATCCTTATCCAAATGATCCCTTGAAGAGTGAGGATGTAGATGAAGAAAACAAACCTTTGTTTAAAGAAAAAAATACTGGTCAGGTTTTCACCCAACCAAGACAATTGAAAACAGTCGGATCGTCAGAGAGTTCCCCGAATAGTGATCAGAAGGAGTTGAAAGTATCAACTGCAGAAATTCCACTTTTAAGTGAAGTTAGTTTACCAATTAAAGGAAGAAGGAGATGGAAAATGATTCCACGGAGAACATTCATACCAAAAGAGAAGCCTTCTGAGAACATCATATTGAAAACTCAACATAATATGTATTCTACCTTAAAGGATAAGCTTTCTAGTTGCATGTCATCTTATCTGTTCCGCAGATGGTGTACTTTTGAATGGTTTTATAGTGCTATTGATTATCCATGGTTTGCCAAAAGGGAATTCGTGGAGTACTTAAATCATGTAGGACTAGGGAATATCCCAAGACTAACTCGTGATGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTACGTGAAGAAAGACAAAAACTTGAACAATATCGGGAATCAGTGAGGAAACATTACACTGATCTGCGGACTGGTATCAGTGATGGACTTCCAACAGATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCACCCAAAAACAAGAGAGATTCACGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGATCGTCCTGAATTAGGGGTTGAATTTGTCCTGGACATTGATTGCATGCCTTCAAATCCATTAGATAATATGCCTGAAGCTTTGAGGAGGCAAGTCAGTGCCAGAAAAGTCTCTTTGATGAGTAAAGAGCCACAGGTTAATGGAAATTCAAGTTTTGGAGGATGCACTACACGTGCTTCACCTGTGAAGGGGGATGTTAACCATTGTGTTTCTCAAGCGAAGGCGGCTACAATTGATAACTTCTGTGTACAAAAAACAGTTTGTGCTCAACCATGCACACTGACTCATCATCAAGCCAAGGAAGCTGATATACATGCACTTTCTGAGCTAAAGCGTGCTCTGGATAAAAAGGAAACATTGCTGATGGAGCTTAAAAGTGCAAATACTGACATTTTGGAAAACCAAAATGACATTGAATGCTTAAAAGATTCCGAGGCTTTCAAGAAGCATTATGCCACGGTACTTGTAGAGCTGAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGGTTCATTTGAGGCAACGCAATACTTACACTGGAAACTCTCTAACACCATGGATGAAGCCCCAAGTTAGTTTCAATGATCATGATAACCTTCCCGGTATGTTGGATAGTTCTCTACCACAAGAGTTAGGGTCAACCGTCAATGAAATTATTAAAGGATCCAGGCTAAGCGCAAAGGTAATGGTCGACGCTGCGTTTCAGGCATTGCCTTCAACAACGGAAGATGAAGACGCTTTCACGAGGATTGGACAGGCACTGGATTCTATTGATTACCAGCAGTTAGCCTCCAACACTAGGTTACCTCTGATCAGGTCTCAAGAACAAGTGAATGGCAGTTCTTATAATCTTAATCAGTCAACTTTACTCAACGATGCATCTAGTCCAAAACTGCATAATGATTCTAACAAAGTTTACACCGAAATTCCTTTGGAGCTTATTACTTCATGTGTTGCAACATTAATCATGATACAGACTTGCACTGAAAGGCAATACCCTCCGGCTGACGTGGTTCAGATGTTAGATTCTGCTGTTACTAGTTTGGAACCATGCTCTCCTCAAAACATTCCTATTTTCAGAGAAATTCAAATGTGCATAGGAAGAATTAAGACTCAGATTTTAGCTCTAGTCCCTACTTGA 3420 0.4129 MAPARKSRSVNKRFSASNEVSPDNDGVNSIKNKLRKKKLTDKLGSQWSKEELEQFYQAYRKYDKDWKKVAAVVRNRSIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLVGSDSERESNDSPGSRKPLKRKIEKVQLSVSKDSVQSQSIASSDGCLSLLKKRRFDGIQPRAVGKRTPRVPVHYSFKKDDRENYVSPNKRSLGSTVAANDDEIAHVAALALAEAAQRGGSPQVSQTPHIRAEHKSPHVQNLGKMCQTLETASAKFHHASVDEEFLEGSMESRGAENGEYVRDSSSLMDMEGKDSFVLQKGKMIYRKKERVVNIGNHQLDDGGEACSGTEEGVSFSSLKEKVDIEVNNAKLEQSSLKSKRKRSKKLFFGDEIPALDALQTLADVSLMMPASMVESELSGQVKGDIVTVDKGDKSALPEAASTSHTRDKIKLSGSKQKVVHVVSGIEVSTPTKPKLGKESANDAKALYESKEQLSPADRTWKRKRNSVVSKVASTKLNPYPNDPLKSEDVDEENKPLFKEKNTGQVFTQPRQLKTVGSSESSPNSDQKELKVSTAEIPLLSEVSLPIKGRRRWKMIPRRTFIPKEKPSENIILKTQHNMYSTLKDKLSSCMSSYLFRRWCTFEWFYSAIDYPWFAKREFVEYLNHVGLGNIPRLTRDEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTDLRTGISDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDHDKCRIQFDRPELGVEFVLDIDCMPSNPLDNMPEALRRQVSARKVSLMSKEPQVNGNSSFGGCTTRASPVKGDVNHCVSQAKAATIDNFCVQKTVCAQPCTLTHHQAKEADIHALSELKRALDKKETLLMELKSANTDILENQNDIECLKDSEAFKKHYATVLVELKEASGQVSDAMVHLRQRNTYTGNSLTPWMKPQVSFNDHDNLPGMLDSSLPQELGSTVNEIIKGSRLSAKVMVDAAFQALPSTTEDEDAFTRIGQALDSIDYQQLASNTRLPLIRSQEQVNGSSYNLNQSTLLNDASSPKLHNDSNKVYTEIPLELITSCVATLIMIQTCTERQYPPADVVQMLDSAVTSLEPCSPQNIPIFREIQMCIGRIKTQILALVPT* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1296 1139 PANTHER LIN-9 1 1139 IPR010561 GO:0006351|GO:0017053
Lan4g1296 1139 MobiDBLite consensus disorder prediction 1 35 - -
Lan4g1296 1139 Pfam DIRP 637 738 IPR033471 -
Lan4g1296 1139 SMART sant 43 91 IPR001005 -
Lan4g1296 1139 Coils Coil 867 890 - -
Lan4g1296 1139 MobiDBLite consensus disorder prediction 10 28 - -
Lan4g1296 1139 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Lan4g1296 1139 MobiDBLite consensus disorder prediction 518 532 - -
Lan4g1296 1139 MobiDBLite consensus disorder prediction 534 563 - -
Lan4g1296 1139 ProSiteProfiles SANT domain profile. 42 77 IPR017884 -
Lan4g1296 1139 MobiDBLite consensus disorder prediction 505 563 - -
Lan4g1296 1139 SMART DIRP_2 638 739 IPR033471 -
Lan4g1296 1139 MobiDBLite consensus disorder prediction 481 500 - -
Lan4g1296 1139 CDD SANT 47 81 IPR001005 -
Lan4g1296 1139 Gene3D - 4 99 - -
Lan4g1296 1139 SUPERFAMILY Homeodomain-like 40 90 IPR009057 -
Lan4g1296 1139 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1139 IPR028306 -
Lan4g1296 1139 Coils Coil 690 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1296 Lan-Chr4 21697140 21711600 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g1296 DIRP 2.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1296 - - gmx:100789533 1570.83