Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1295 ATGTCAAACATCACAAGTTGTGATAGTGTGAGCTTCTCCACTGAGAATACAAGAGAAGATGCAGTTAAGCAGCAATTAGAGATACTTGGCCAGTTCAATAGTCCTAATTCTACATCTCATACTTCAACAACAACGACAACAACAAATAATAATAATAATTATTATAGCAATGTTTCCAACACAAGTTCACAACCACTTTCTTCTGCTAAGAGGAAAAGAAGCCTGCCAGGAAATCCAGACCCAAGTGCTGAAGTCATAGCTCTATCACCAAATGCACTCATGGCCACAAACAGGTTCCTATGTGAAATATGCAACAAAGGGTTTCAAAGAGACCAAAACCTTCAATTGCACCGTCGAGGCCATAACTTGCCATGGAAGCTTAAACAGAGAACAAGTACAGAAATTAGAAAGAGAGTTTATGTTTGCCCTGAACCCTCATGTGTTCATCATAACCCAGCAAGAGCACTAGGTGATCTTACTGGTATTAAAAAGCACTTTTGCAGAAAGCATGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCCAAGAAATATGCTGTTCAATCTGACTGGAAAGCTCATTCAAAAATCTGTGGTACGAGGGAGTACAAATGTGACTGTGGCACCCTCTTTTCCAGAAGAGATAGCTTCATTACCCATAGAGCTTTCTGTGATGCACTGGCAGAGGAAAACAACAAAGGCAATGAAGGACAATTGTCAAAGATGGATTCAAACTTGCAATGCCAATCAATCCCAAACCTGGTTCCATCATTACCAATCAACACCAACATTATTCCCATCCCACAAATTGGAGGGACAGCATCAGAATTCAACAACAAAAATAATCCATTATCATCATTACAAATTCCTGCAAGTTCAAAAGCCTTCAACATGGCAATAAGAAACTCTTCTCCCTCTCTTCAACTGAGTTCAAACATTTTAGCTTCTCATGAAAGCTCGTCACTCATGTCTGCCACTGCATTACTTCAAAAGGCTGCTCAAATGGGTGCAACCGTGAGTAATAATAATAGCAATGTTTCTACCACCATGGCACCACCATCATATGGTTTGGTGCAATTACAACAACCACCGCCAAATAATGTTTATTCCTTCATGAACCACTACATGCAACAACAACAACATGATCATATTTCATCTCATTATAATAGTTTCAATGCACATCATGAGATGAGTACTGGTGATAATGCAGAAGGTATTGTTGTTGGAATGAATGGTGGGGATATGTTTAATGTTATATTGGATCAAAGTAAGGCGTTATCTAAGATCATAGATCAGAATAGTAGAAGCATTAACAATGGGGTTTTGCATCAAACAAATGGAGGGTCAAGTGGTGGTGCTCTTAACATTGGTGGCGAAACTAAGGGAAGTGGTGATGTAATGACTCTGGACTTGTTGGGTATAGGAGGTGGTGACGGTGGCAGTGGTGAAAATATGCATGGGAATTTGAATATCTATGGTGGTGGTGCCCAACAAGATGAAACTGCTGCAGCAGATGATTTTTGGAGAAATTGGTCAACCAAGAATGCAGGTTTTGGATCATTTTCAGCATCTAGCAGCATGTGA 1581 0.3985 MSNITSCDSVSFSTENTREDAVKQQLEILGQFNSPNSTSHTSTTTTTTNNNNNYYSNVSNTSSQPLSSAKRKRSLPGNPDPSAEVIALSPNALMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEENNKGNEGQLSKMDSNLQCQSIPNLVPSLPINTNIIPIPQIGGTASEFNNKNNPLSSLQIPASSKAFNMAIRNSSPSLQLSSNILASHESSSLMSATALLQKAAQMGATVSNNNSNVSTTMAPPSYGLVQLQQPPPNNVYSFMNHYMQQQQHDHISSHYNSFNAHHEMSTGDNAEGIVVGMNGGDMFNVILDQSKALSKIIDQNSRSINNGVLHQTNGGSSGGALNIGGETKGSGDVMTLDLLGIGGGDGGSGENMHGNLNIYGGGAQQDETAAADDFWRNWSTKNAGFGSFSASSSM* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1295 526 MobiDBLite consensus disorder prediction 31 71 - -
Lan4g1295 526 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 36 477 - -
Lan4g1295 526 MobiDBLite consensus disorder prediction 31 83 - -
Lan4g1295 526 Gene3D Classic Zinc Finger 96 196 - -
Lan4g1295 526 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 36 477 - -
Lan4g1295 526 SUPERFAMILY beta-beta-alpha zinc fingers 98 195 IPR036236 -
Lan4g1295 526 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Lan4g1295 526 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 121 IPR013087 -
Lan4g1295 526 SMART c2h2final6 140 170 IPR013087 -
Lan4g1295 526 SMART c2h2final6 99 121 IPR013087 -
Lan4g1295 526 SMART c2h2final6 175 195 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1295 Lan-Chr4 21666018 21669970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1295 44 339 IDZ Gene Family AT3G50700 54.599 1.05e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan4g1295 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1295 - - lang:109354363 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1295 4 21666018 21669970 Lan4g1295 4 21666018 21669970 ECH
Lan8g0317 8 5262342 5266757 Lan4g1295 4 21666018 21669970 LSH