Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1293 ATGGGTTGTGGTTGTAAGGTTCTTTCCATGATCTTCATCATCATGACCCTTTTGATGCTCCTATCATTGCAAAGAATCCACATTTTAAATGTGGATCATGATATGTTTATGGAGATGGAGGTTAAGAATGAGGAAGGAAATGAAAACCAAGTTAAGAAAATTTTAGGACTTGATGAGAATGAAGTGAAAGAAGCATTTATAGTGGAAAAGTTTAGAGCTTTGCTTGGTCTTAAGAGTTTTCACATTGATTCTTCTCAGTTTCTATCACCTTCTCCATCACCTAACATTGAACCTGAGGCTCCAGCTCCAGCACCTTCTCCACTAGCACCACATTTCCACACTCATTCCTATCATCATCCAAGAAATCACTCTCATTGGAATCCACCACTTTACAACAAAACTAATGAAGATAGAGGCAAAGCTAAGAGAGTGCTAGTAGCTACCGTTGTATCTGTGGGAATTGCTACATTAGTTTGTGTTTGTGGATTAATCTTAGTCTGCAGGAACTTCAGAAATAACAGAAAGAAGCCCAAAAGGACAATGCCACTGTGTAGTAGCAAGAACAAAGGAACTGGATCAAGCAAGGTGAGTTTAAACTCTGGGGGGTTAGATCTGTTTTATCTTAATGTTTTAGGTGATGATATAGAACAACAAGGTTGTACCTTAAAAAGAACTTGTGAGAGTAACATAGAATGTTATGATAATGTTAGTAGTTCTTCCACTAAGGAAATTCTACCTGTCCATGAAGATAAGGAAGAAGAAGAATCAGTGAAAAATGAATATGAATCTGATGGTAATGATAAAACTATCCCTGAAGAAGAAGAATGTCATTCATCATCAGGTGATGAAAGTTTTCATTCCTTTGTTGATTCACAATCAAATTTAAGGCTTTCTAATGCTTCAGCTAGTGACACATTATCTATGTCCCCTCAAAATTCAAGTTCATTATTACCAACCCATTTTCCTACTTCTCCTCAATGCACATTTTCAAAGACACAATCTCCCAAAACTTTCATGCCCCCTCCACCAACACCAACACCTCCACCTCTTCAAATGCCACTTTTCAAATTGCATTCTTTGACAACTCATAATAATTTATCATCTTCAAGAAACTCAGATACTTTCTCAGCATGCAATCCAAGTCCAGAAAAAGAGTTGCTTTCTTCATCTCAACTTAACTCAACAAAATCCCCTTCCACCATTCCACCATCACCATGCCCTCCTCCTTTTCTTAAAGGCAACAATAACAATAGCAAAACAACACCTCCTCCACCATCTCAACTACCTCATTTTAAACCACTTGTTAAAGATGCAGTGCCACTACCAAAACTCAAAGCACTTCATTGGGACAAAGTAAGAGCTGCACCAAATGGGACAATGGTATGGGACAAGCTACGATCAAGCTCATTTGAGTTGGATGAGGAAATGATGGAGTCACTTTTTGGCTACAACATACAAAATTCAATGAATAATGATGAAACAAAGAGCAAAAGCACATTTCCTAGCAAGCATGTACTTGAGCCAAAACGTTTGCAGAACATTACAATACTCTCAAAAGCACTCAATGCGACATCTGAGCAAATATGCCAAGCCTTAATACAAGGGAAGGGCTTGTCTTTGCAACAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAAGAAGAGGGAAAACTGTTCAACTATAAAGGTGACATAAATGAATTGGGTTCCACTGAAAAGTTTGTGAGGGCAATGCTTAGTGTGCCATTTGCATTTCAAAGAGTAGAAGGCATGCTTTACAAAGAGACTTTTGAAGATGAAGTTGTTCACCTCAAGAACTCTTTTTCAATGCTAGAGGAAGCATGCAAGGAACTAAGATCAAGCAGATTATTCTTAAAACTACTAGAAGCAGTTCTGAAAACAGGAAATCGTATGAATGTTGGTACAATAAGAGGAGGTGCTAGAGCATTTAAACTAGATGCTCTTCTCAAACTATCAGATATAAAAGGAACTGATGGAAGAACAACTTTACTTCATTTTGTTGTTCAAGAAATTGTTCGTGCTGAAGGAATAAGAGTCTCAGATAGCATCATGGGTAAAATCTGTCAGAAAAGTAGTAAAGATAATATAACAGAAGAAGAGAAAGAAGAAGGTTATAGAAGAATGGGACTAGAATTAGTTTCTGGTCTCAGCATTGAGTTATATAATGTGAAGAAAACAGCTACTATTGACTTGGATGTTCTTGCTAGCTCAGTGTCAAATTTAAGAGATGGAATGGTTAAGTTGCAATGTCTTGTGGAGAAGGATTTGAGTAATGGTGAAGAGAGTGAGAACTTTGTTAACTCAATTAAGTGTTTTCTAAGTTATGCAGATAGAAAGTTGAGGGAGTTGCAAGGAGATGAAGATAGAGTGATAGTAAGAGTGAAAGAGATTACTGAATATTTTCATGGGGATGTGAGTAAAGAAGATAATCCACTAAGGATCTTTGTGATAGTTAGAGATTTTTTGGGTATGTTAGATAATGTTTGTAAAGAGCTTAGAAGGTCTAAAGCTCCACATACCCCAAACCCTCTTGCTCCATCAGAGACTAGAGTTTAG 2580 0.3733 MGCGCKVLSMIFIIMTLLMLLSLQRIHILNVDHDMFMEMEVKNEEGNENQVKKILGLDENEVKEAFIVEKFRALLGLKSFHIDSSQFLSPSPSPNIEPEAPAPAPSPLAPHFHTHSYHHPRNHSHWNPPLYNKTNEDRGKAKRVLVATVVSVGIATLVCVCGLILVCRNFRNNRKKPKRTMPLCSSKNKGTGSSKVSLNSGGLDLFYLNVLGDDIEQQGCTLKRTCESNIECYDNVSSSSTKEILPVHEDKEEEESVKNEYESDGNDKTIPEEEECHSSSGDESFHSFVDSQSNLRLSNASASDTLSMSPQNSSSLLPTHFPTSPQCTFSKTQSPKTFMPPPPTPTPPPLQMPLFKLHSLTTHNNLSSSRNSDTFSACNPSPEKELLSSSQLNSTKSPSTIPPSPCPPPFLKGNNNNSKTTPPPPSQLPHFKPLVKDAVPLPKLKALHWDKVRAAPNGTMVWDKLRSSSFELDEEMMESLFGYNIQNSMNNDETKSKSTFPSKHVLEPKRLQNITILSKALNATSEQICQALIQGKGLSLQQLEALVKMVPTKEEEGKLFNYKGDINELGSTEKFVRAMLSVPFAFQRVEGMLYKETFEDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLSDIKGTDGRTTLLHFVVQEIVRAEGIRVSDSIMGKICQKSSKDNITEEEKEEGYRRMGLELVSGLSIELYNVKKTATIDLDVLASSVSNLRDGMVKLQCLVEKDLSNGEESENFVNSIKCFLSYADRKLRELQGDEDRVIVRVKEITEYFHGDVSKEDNPLRIFVIVRDFLGMLDNVCKELRRSKAPHTPNPLAPSETRV* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1293 859 MobiDBLite consensus disorder prediction 300 335 - -
Lan4g1293 859 Gene3D Formin, FH2 domain 457 848 IPR042201 -
Lan4g1293 859 MobiDBLite consensus disorder prediction 261 281 - -
Lan4g1293 859 SMART it6_source 434 848 IPR015425 -
Lan4g1293 859 MobiDBLite consensus disorder prediction 300 432 - -
Lan4g1293 859 PANTHER FORMIN-LIKE PROTEIN 338 854 - -
Lan4g1293 859 PANTHER FORMIN-LIKE PROTEIN 13 295 - -
Lan4g1293 859 MobiDBLite consensus disorder prediction 357 399 - -
Lan4g1293 859 MobiDBLite consensus disorder prediction 89 134 - -
Lan4g1293 859 ProSiteProfiles Formin homology-2 (FH2) domain profile. 434 859 IPR015425 -
Lan4g1293 859 MobiDBLite consensus disorder prediction 94 108 - -
Lan4g1293 859 SUPERFAMILY Formin homology 2 domain (FH2 domain) 340 844 - -
Lan4g1293 859 MobiDBLite consensus disorder prediction 336 352 - -
Lan4g1293 859 PANTHER FORMIN-RELATED 338 854 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan4g1293 859 PANTHER FORMIN-RELATED 13 295 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan4g1293 859 MobiDBLite consensus disorder prediction 241 287 - -
Lan4g1293 859 Pfam Formin Homology 2 Domain 440 833 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1293 Lan-Chr4 21646823 21651526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1293 10 854 FH2 protein (formin) Gene Family AT3G05470 49.009 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1293 - - gmx:100793761 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0646 20 5111160 5115805 Lan4g1293 4 21646823 21651526 LSH