Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1286 ATGAAAAGAACTAAAAAAACCCTAGCTCCCTTCAAATATCATCATCACCATAAGTTGAAACAAGTGCAGCAGTTTCATACAACCACCAAAGAAGAGAACGAAGATCCAAAACCCGAAGAACCTGCAATGGGGATAGATCTTAAAGCCGGTGGTAAGAGCAAAAAGACCAAAAGAACAGCACCTAAATCCAATGATATCTACCTTAAGCTCTTGGTCAAGCTTTACCGTTTCCTTGTTCGGAGAACTGGAAGCAAGTTCAATGCTGTTATACTTAAGCGCTTGTTCATGAGCAAAATTAACAAGCCTCCTCTTTCATTGTCAAGGTTGATTAAGTATACCAATGGCAAGGAAGGTAAGATTGCTGTTGTGGTTGGTACCATAACTGATGATATCCGCACATATGAAGTTCCACCCTTGAAGGTTACAGCACTCAGGTTTACCGAAACTGCTCGTGCAAGAATCGAAAAGGCCGGTGGTGAATGCTTGACATTTGATCAATTGGCACTTAGGGCTCCTCTTGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTACCACACAGCCACACCAAGCCGTATGTGCGGTCTAAGGGAAGGAAGTTTGAGAAGGCTAGAGGAAAGAGGAACAGCAGAGGATTTAGGGTTTGA 690 0.4406 MKRTKKTLAPFKYHHHHKLKQVQQFHTTTKEENEDPKPEEPAMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKPPLSLSRLIKYTNGKEGKIAVVVGTITDDIRTYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGKRNSRGFRV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1286 229 MobiDBLite consensus disorder prediction 19 59 - -
Lan4g1286 229 Pfam Ribosomal protein 60S L18 and 50S L18e 44 229 IPR021131 -
Lan4g1286 229 PANTHER BNAC02G39900D PROTEIN 39 229 - -
Lan4g1286 229 MobiDBLite consensus disorder prediction 24 42 - -
Lan4g1286 229 PANTHER 60S RIBOSOMAL PROTEIN L18 39 229 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lan4g1286 229 Gene3D - 43 229 - -
Lan4g1286 229 SUPERFAMILY Ribosomal proteins L15p and L18e 62 181 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1286 Lan-Chr4 21593014 21594461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1286 45 229 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 3.23e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1286 K02883 - gmx:100791657 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1286 4 21593014 21594461 Lan4g1286 4 21593014 21594461 ECH
Lan8g0328 8 5327462 5329347 Lan4g1286 4 21593014 21594461 LSH
Lan4g0888 4 10835939 10838637 Lan4g1286 4 21593014 21594461 PCT
Lan2g0279 2 2375823 2378181 Lan4g1286 4 21593014 21594461 PCT