Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1272 ATGGCAACCAGGCGTTTGAGGGCATTCAAGAGATGGATGAAGTCCAAAGGATTCGAATGGAGTGATGCATTGGAATTTGTGGATACCCCAAAAGAGGGAATAGCTGTGAGGGCATTGTGTGAATTGAAGGAAGGTGATGTTGTGGCCAAGATGCCAAAGGAAGCTTGTCTTACAATAAAGACTAGTGGTGCTTGTGGCATCATTGAAGATGCTGGTTTGGAAGGTCTTTTGGGTTTAGCATTTGCTATCATGTATGAGAGAAGTTTGGGTGGTGATTCCCCTTGGGCTGGGTACCTTCAGCTATTGACTTACCAAGAGTGTGTGCCATTGGTTTGGACCCTTAATGAAGTCAACGAGCTTTTACGCGGTACTGAGCTTCACCAGGAAGTGCAAGAAGATAAAGCTCTTATGTATGAGGATTGGAAAGAGAGGATCCTGCCCCTATTGAATTTAGCACCTTCAAAGCTTAACCCAGTTTTTTTTGGTATAGAGCAATACTTTGCTGCAAGAAGTCTTATTTCTTCGCGATCTTTTGAGATAGATGATTACCATGGTTCTGGCATGGTCCCATTGGCTGATATGTTCAATCATAAAACAGGTGCTGAGGATGTGCATTTCACTGCTACGCCCTCTAACTATGAATCTGACAATGATGTTGATGGTAATAACAGTGATGAGAGCATCACTGATGAAGAAGCATTGGCTCAAAATTCCTCTATAGATGCGACTGATTTTGATGCTGCTCACGTTAGTGACTCCGAGTGTTCTTCAGATATAGGAGGTGATCCTTCAATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAGCCGAGGTATTCAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTCACTGAGCAAGATAATCTCTATGACATTGTGAACATTGATTTGGAACTGGTACTTAAATGGTGTTCTTCATTGTTTTCTAGCCGCCACGGTAGAGCAAGAGTCTCCCTTTGGAGAAGGTTAGGCTATTCTGCATGTGGCATCCAAAACTCTGAATATTTTGAGATCTCATTTAATGGAGAACCACAAGTTGAACTCCCCATCCTATTATACATCATGCTATTGTCGGATAAGGCCTACCATGAGTTGGACCTATCGGTATCAACTGCGGGGAAGCGTCATGAATCGAGTAAAACCACTCTCTTGTACGATAAAATCTTCCCAAATAAAGCATCTAACATGAGCAAGAAGTTTTTGCTGACTAATAAAGTATGTGATGCTCTGATATCCCTTGCTGATATGAGGGAGAGTCTGTATGGTTCAGAATCAATAGAAGATCATGTTGAGGCATTGGAAAGGTGTAGTTCGGTTAGTGCGAAAAAGGTGTATCATTCTTTGGTGCTGCGTATCTGTGAACGGAAGATCCTTCAAAAGCTCAGAAATTATGCTTCTCAACCACTCAACAAAGTGACTAATCATAGTACAGAAAGGAAGTTGAGAAGGACAACAAAGAAACGTTGA 1512 0.418 MATRRLRAFKRWMKSKGFEWSDALEFVDTPKEGIAVRALCELKEGDVVAKMPKEACLTIKTSGACGIIEDAGLEGLLGLAFAIMYERSLGGDSPWAGYLQLLTYQECVPLVWTLNEVNELLRGTELHQEVQEDKALMYEDWKERILPLLNLAPSKLNPVFFGIEQYFAARSLISSRSFEIDDYHGSGMVPLADMFNHKTGAEDVHFTATPSNYESDNDVDGNNSDESITDEEALAQNSSIDATDFDAAHVSDSECSSDIGGDPSMLEMIMIKDVSSGAEVFNTYGLLGNAALLHRYGFTEQDNLYDIVNIDLELVLKWCSSLFSSRHGRARVSLWRRLGYSACGIQNSEYFEISFNGEPQVELPILLYIMLLSDKAYHELDLSVSTAGKRHESSKTTLLYDKIFPNKASNMSKKFLLTNKVCDALISLADMRESLYGSESIEDHVEALERCSSVSAKKVYHSLVLRICERKILQKLRNYASQPLNKVTNHSTERKLRRTTKKR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1272 503 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 482 - -
Lan4g1272 503 PIRSF RMS1_SET 1 484 IPR011383 GO:0016279|GO:0018026
Lan4g1272 503 CDD SET_LSMT 23 299 - -
Lan4g1272 503 MobiDBLite consensus disorder prediction 484 503 - -
Lan4g1272 503 Gene3D set domain protein methyltransferase, domain 1 2 298 - -
Lan4g1272 503 SUPERFAMILY SET domain 4 303 IPR046341 -
Lan4g1272 503 Pfam SET domain 33 285 IPR001214 GO:0005515
Lan4g1272 503 ProSiteProfiles SET domain profile. 22 285 IPR001214 GO:0005515
Lan4g1272 503 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 7 482 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1272 1 498 NAC Transcription Factor Family AT3G56570 53.532 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan4g1272 SET 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1272 K05302 - gmx:100794971 744.191