Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1263 ATGGACTTTGATCCAAGCTTCTTATACCAATTTTCTGACCTTTCTATGAAATCCCCAAAACATACTAGAAATTCAGAGATACCCATCATGGTTCCATTGCAACAAACCTCTACTCTAGTTCCACCTCCAACAAAAAACATCTTCCTAACACCTTCTTCAGATAATTCATACACTAATTGGTCCCAAATAAATCTTCTCAATTCCTACTACCCAATAGAATTTTCACCAAATAATAATGCAATGGAAGTCTCACATGAATACCTTTACAATTGTAAAGGAATCTTGGATTTTCCACAACAAATTCCTACTCAGTATGATGCAATTTTACAACCTCATGTGGGCCTTTCTCTTGCACCACCACCTCATATCTATGCATCAATGGTAGTAAATCCTAGGCTTGAAGATGATATTTCACACATTACTAGAGCTGGGAATGGTCATGAGGATACTAATCATAAAATTGTTACCAACACAATCAAAAGCCAGTGGACTCCTGATGAGGATAGAGTTCTCGTGGAATCGGTGAGACGTTTCGGGCTTAAGAAATGGTCTCATATAGCCAAGTTACTGGATGGCAGGGTTGGAAAACAGTGCAGAGAAAGATGGTTCAACCATCTGCGGCCAAACATTAGGAAAGACTCATGGTCTGAAGAGGAGGATTTGATACTTATTGAAGCTCACAAAAATGTTGGAAACAAATGGGCTGAAATTGCAAAGAGATTGATCGGAAGGACTGAGAACACTGTTAAGAACCATTGGAATGCAACTAAGAGGCGCTTGAACACAAAGAAGAGGATCAACAAGCGCATTATTCCAAATGGAGAACTACTTTTCAACTACATCAAGCAAGTTACTACTAAAGCCTTAGCCAAAAAAGAAGTGAAGAAATCCATGAGTGAAATGAACTTAAGGAGTGAGAATCACAATGATCTCAACTTTCACCCAGTTTGGTATAAGAACTCAGAAAATTACTATGAAAATGATGGAGTTGATTGGTTATTGCATTCCTATGCTCCAATGATGGTCGATGCTGGTGAAATGGCAAGTGGGTCAGGTATGAAGGATATATAG 1071 0.3856 MDFDPSFLYQFSDLSMKSPKHTRNSEIPIMVPLQQTSTLVPPPTKNIFLTPSSDNSYTNWSQINLLNSYYPIEFSPNNNAMEVSHEYLYNCKGILDFPQQIPTQYDAILQPHVGLSLAPPPHIYASMVVNPRLEDDISHITRAGNGHEDTNHKIVTNTIKSQWTPDEDRVLVESVRRFGLKKWSHIAKLLDGRVGKQCRERWFNHLRPNIRKDSWSEEEDLILIEAHKNVGNKWAEIAKRLIGRTENTVKNHWNATKRRLNTKKRINKRIIPNGELLFNYIKQVTTKALAKKEVKKSMSEMNLRSENHNDLNFHPVWYKNSENYYENDGVDWLLHSYAPMMVDAGEMASGSGMKDI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1263 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 210 IPR017930 -
Lan4g1263 356 ProSiteProfiles Myb-like domain profile. 207 257 IPR001005 -
Lan4g1263 356 CDD SANT 214 257 IPR001005 -
Lan4g1263 356 Gene3D - 214 274 - -
Lan4g1263 356 CDD SANT 163 206 IPR001005 -
Lan4g1263 356 PANTHER MYB DOMAIN PROTEIN 100-RELATED 150 306 - -
Lan4g1263 356 SUPERFAMILY Homeodomain-like 158 253 IPR009057 -
Lan4g1263 356 Gene3D - 159 211 - -
Lan4g1263 356 PANTHER MYB PROTEIN-RELATED 150 306 - -
Lan4g1263 356 SMART sant 211 259 IPR001005 -
Lan4g1263 356 SMART sant 159 208 IPR001005 -
Lan4g1263 356 Pfam Myb-like DNA-binding domain 163 220 - -
Lan4g1263 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 261 IPR017930 -
Lan4g1263 356 ProSiteProfiles Myb-like domain profile. 155 206 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1263 Lan-Chr4 21218319 21221009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1263 159 294 MYB Transcription Factor Family AT4G18770 61.029 1.55e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan4g1263 Myb_DNA-bind_6 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1263 K09422 - lang:109346178 742.265