Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1224 ATGTTGCATGATGTTTTTGATCAACCACTGCCACAAAAGGAGGAGGAGGAACTTACCATTGATGAAATTTCAATCCCTATTAGCAATCAAATTTTGGATCTTTGTGACTCTGAATTGTTCCAAGAGCCTCATCAGAATTCTGAGGTTACCTCAAGCTCAAATTGTTGCTATGATGAAAACTCATCATATGTAACAAATATATCTCTAGCTTTAGATAATATAGACAATAAGATAAATAGTAATAGCAATAACACAGTGACTACCCCAACTAGCACCACCACAAACAACAACACAACCAATAACAGCAATCTTTCAATCATATTTGACTCACAAGAAGACATTGACAATGATATATCTGCCTCAATAGACTTCTCATCATCCAAAACTTTCAATATTCCACAGTTTCTCCAAGAACAGTTCGGTAATTTCTCTTCTATGCAGCAGCCTAATGTGCAGCAACAATTAGCAGCATGTAATTCAGGTGTGGAAGGATTTTCTCAGTATCCGAATGACCCTGTTGCACCACTCATTGGAGCTCCATTAACTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTTCCTTCTTATATGCCTCTAAACCCTTCATCTCTATCTTGCAATTTTCTTGGCCCTGCCATAGGACAATACATGCCTATTGGTCCTCTTACCACTGCCTTGTCCGCTGACCGTTCCGGATTGTTTGGTGAGAGCATGCTTTTTGGTTCTGATATTCAGACACAAGAGCTGGAATACCAAGCCGAAAATGGTGGAATGTTTTGTACAGATTCAATGCCACAAGTGTTTAGTCCTTCAGACCTTCAGGCACTTGGTGTTGTTGAGAATCAGAAGCTAGTAGTTGGTGCTGGGAATTCTGCTACTTTGACAACAGAAATCTCATCTTTGGAGGACTCTACCTTCAAGGTTGGAAAACTTTCTGTTGAACAAAGGAAAGAAAAGATCCATAGATACATGAAGAAAAGAAATGAAAGAAACTTTAGCAAGAAAATTAAGTATGCATGCCGAAAAACTCTAGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAATGATGAATTTGGAGATACACATAACAATCATAGATCTGCTAGTAGCAATCATGAAGAAGATGATGAAGAAGTTGTTGTGAAAGAAGAAGATGATATGGTTGATTCATCAGATATCTTTGCTCACATCAGTGGAGTGAACTCCTTCAAATGCAATTATTCCATTCAATCATGGATTTGA 1251 0.3837 MLHDVFDQPLPQKEEEELTIDEISIPISNQILDLCDSELFQEPHQNSEVTSSSNCCYDENSSYVTNISLALDNIDNKINSNSNNTVTTPTSTTTNNNTTNNSNLSIIFDSQEDIDNDISASIDFSSSKTFNIPQFLQEQFGNFSSMQQPNVQQQLAACNSGVEGFSQYPNDPVAPLIGAPLTSVFEEDCISSVPSYMPLNPSSLSCNFLGPAIGQYMPIGPLTTALSADRSGLFGESMLFGSDIQTQELEYQAENGGMFCTDSMPQVFSPSDLQALGVVENQKLVVGAGNSATLTTEISSLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGDTHNNHRSASSNHEEDDEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1224 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 20 416 - -
Lan4g1224 416 MobiDBLite consensus disorder prediction 356 381 - -
Lan4g1224 416 PANTHER CCT MOTIF FAMILY PROTEIN 20 416 - -
Lan4g1224 416 Pfam CCT motif 316 358 IPR010402 GO:0005515
Lan4g1224 416 MobiDBLite consensus disorder prediction 79 98 - -
Lan4g1224 416 MobiDBLite consensus disorder prediction 356 379 - -
Lan4g1224 416 ProSiteProfiles CCT domain profile. 316 358 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1224 Lan-Chr4 20116844 20121497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1224 316 377 C2C2-CO-like Transcription Factor Family AT5G57660 45.312 1.38e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan4g1224 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1224 - - aprc:113871720 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1251 11 18370740 18375322 Lan4g1224 4 20116844 20121497 LSH