Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1196 ATGGCAGAGACTACAGTATCACTTGTTTTGAATGAAATGTATAAACTCTTGAGTGCAGAGGTAAATCTACAAACAAGTGTCCACAATGAACTTGCAGAGCTCAAAGATGAACTAGAGAGCATTCAAGCATACCTCAAGGATGCAGATACAAGGGCTGCAGCTGAAGTAGACAATAAAGAAGGGGTAAAGGTTTGGGTGAAGAAGTTGAGAGAAGCATCATTTCACATAGAAGATGTCATTGATGAATACCTCATCTATGAAACTAAGCAGACTTATGATTCTGGATGCATAGCTCTACTCCGTATAATTATTCCCCTGATTGAAACTTTGATAGCTCGGCATCGTATAGTGTATCAGATTCGAGGCCTTAAACTATATGTTCATGAAATCAAAGCAAGAAGTGAAAGGTATAACTTTCATGAGGAAGGATCATTAAGAAATGGTAGAGGGACCCAACATTTCAAATGGGATGATCCTCGACTGGGTTCCCTTATCATGGAAGAAGCTGAAGTCGTGGGATTTGAGAACCCAAGGGAGGAATTGGTCCATTGGTTGGTGAATGGAGAGACATCTCGCACTGTGGTTTCAGTTTTTGGCATGGGAGGACTTGGAAAAACAACTCTTGCTAATAATGTTTTTCACAACAACACGGTGAAAGATTACTTTCATTGTCGTGCTTTTATCACAGTGTCTCAAACATACACAGTGGACTCTTTGTTGAAGGACATGATGAAACAATTTCATAAAGAGAATAATGATTCTCTTCCTCTTGGTATCAACACGATGGATGGCATGTCACTTGTGACTGAAGTGAGGAGCTACTTGCAAAATAAGAGGTATTTGATTGTCTTTGATGATGTATGGAAAGAAATTTTTTGGGATGAGATCCAAAATGCTATGCTTGAAAATAAAGGAAGTAGGATAATGATCACAACTAGGAACTTGGATGTTGCAAATTATTGTAAGAAATCTTCTAATGTTAGAGTGCACAACTTGCAACCCCTTCCTACAAGCAAAGCATGGGAACTCTTCTGTAAGAAGACGTTTCGATTTAGTTCTAATGGAAATTGTCCGTTAGAGCTTCAAAATACTTCTCATGAAATTGTTAAAAAATGTGAAGGGTTACCACTTGCAATTGTGGCCATTGGAGGTCTTCTGTCTACCAAAGATAAAACTGTACTTGAGTGGAAAAAACTATGTCAAAATCTTAGTTCTGAGCTACAACGTAATCCACATTTGGCTAGTTTAACTAGAATTTTAGCACTCAGTTACGACGACTTGCCCGACTATTTGAAATCATGTATCTTGTATTTTGGTATATATCCAGAAGACAGCTCTATCAGGTGCACCAGAATTATAAGGCAATGGATAGCTGAGGGTTTTGTAATACATGAGGAGAATAAGACTTTAGAAGAAGTTGCCAAAGAATACTTGACAGAGTTGGTCCATAGAAGCTTGGTTCATGTTTCTAAAGTTAATTATAATGGGAAACCTTCAAATTTTCGAATTCATGATTTGCTACATGACATGATGGTTAGCAAAATGAAGGACTTCAGTTTTTGTCATGTTGTACGTAAAGATGACCAAGATTTCTATCATGATCTAATGACTAGACGCTTGTCCATAGCAACCAGTTCCATTGATGTGCTTATGAGCATTAAACAATCGAAGATTCGGTCTATGTATATGTTTGAAAGAGAAAAATTGTCCGAAGACTTTTTGAGTAGATTCTTTGCCAAATCCATACTTCTAAAAGTATTGGACTTGGAAGGTGCTTCATTGGACTATGTTCCTGATCATTTGGGGAATATTTTCCACCTGAGGTTCTTGAGTCTAAGGAAGACAAAGGTTAAGGATCTTCCTAAATCTATTGGCAAGCTGCAAAACCTGGAGACGTTGGATTTGAAAGAAACACCAGTGCATGACTTGCCAAGGGACATATGCAAACTTACAAAATTACGCCATCTTTTAGTTTGCTGTAGAAAGTCAGAAGAATCTAATACGATGAACTACGAAATTGGGATGCGTATGAATAAAGGAATTGGATGCCTGCAACTTTTACAAACTCTGTATCATGTGGATTTAGACCATGGTGGATTAGACCTCATCAAAGAGTTAAAAATGCTGAGGAAGTTACAGAAGTTGGGCTTGAAGAATGTTAAGAGAGAATATGGAAAGGCTCTGTGTGACTCAATACAGGAGATGAACCATCTTGAATCTCTTTCTGTTAGTGGAAAAACAGAAGTTGAAATCATAGACTTGCAACATATTTCATCTCCCCCACAACTTCGTCGACTGGACCTGTTTGCGTGCTTAGAGAAGTTGCCAGATTGGATTTCAAGGCTCAGCCAGCTTGTAAGGTTGTCATTTCGTTATTCTAAGTTAACAAGTGATCCACTGAAGTCGCTTAAACATCTGCCAAATTTGATGCGTCTCACAATCGCCATAGATGCATACGATGGTGACACATTGCATATTGAAGCAGGGTTTCCAAAATTAAAGAGGCTAAAACTCTCAAGGTTGCAAAATTTGAATTCCATTGTTGTAGATAATGGAGCCTTGCCTGCTGTTAAAATAATTCGCATAGGGAATATACCTCATCTGAAGGACTTTCCCTCTGGCTTTCATCTACTTCAAAGCTTAGAAACTCTGTATTTGAATAATATGTCACCCGAGTTCAACCGAAGCATTGATCCAAATGATGGATCCAAGTACTGGGAAATCAAACATGTGCAACTTGTTTCAATGAGAGAAGGGGTCGACGGTCGTTATAGCTATAGTACTATTCGTCATCCAAGGAACACAACGTGA 2811 0.3838 MAETTVSLVLNEMYKLLSAEVNLQTSVHNELAELKDELESIQAYLKDADTRAAAEVDNKEGVKVWVKKLREASFHIEDVIDEYLIYETKQTYDSGCIALLRIIIPLIETLIARHRIVYQIRGLKLYVHEIKARSERYNFHEEGSLRNGRGTQHFKWDDPRLGSLIMEEAEVVGFENPREELVHWLVNGETSRTVVSVFGMGGLGKTTLANNVFHNNTVKDYFHCRAFITVSQTYTVDSLLKDMMKQFHKENNDSLPLGINTMDGMSLVTEVRSYLQNKRYLIVFDDVWKEIFWDEIQNAMLENKGSRIMITTRNLDVANYCKKSSNVRVHNLQPLPTSKAWELFCKKTFRFSSNGNCPLELQNTSHEIVKKCEGLPLAIVAIGGLLSTKDKTVLEWKKLCQNLSSELQRNPHLASLTRILALSYDDLPDYLKSCILYFGIYPEDSSIRCTRIIRQWIAEGFVIHEENKTLEEVAKEYLTELVHRSLVHVSKVNYNGKPSNFRIHDLLHDMMVSKMKDFSFCHVVRKDDQDFYHDLMTRRLSIATSSIDVLMSIKQSKIRSMYMFEREKLSEDFLSRFFAKSILLKVLDLEGASLDYVPDHLGNIFHLRFLSLRKTKVKDLPKSIGKLQNLETLDLKETPVHDLPRDICKLTKLRHLLVCCRKSEESNTMNYEIGMRMNKGIGCLQLLQTLYHVDLDHGGLDLIKELKMLRKLQKLGLKNVKREYGKALCDSIQEMNHLESLSVSGKTEVEIIDLQHISSPPQLRRLDLFACLEKLPDWISRLSQLVRLSFRYSKLTSDPLKSLKHLPNLMRLTIAIDAYDGDTLHIEAGFPKLKRLKLSRLQNLNSIVVDNGALPAVKIIRIGNIPHLKDFPSGFHLLQSLETLYLNNMSPEFNRSIDPNDGSKYWEIKHVQLVSMREGVDGRYSYSTIRHPRNTT* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1196 936 PRINTS Disease resistance protein signature 194 209 - -
Lan4g1196 936 PRINTS Disease resistance protein signature 274 288 - -
Lan4g1196 936 PRINTS Disease resistance protein signature 372 386 - -
Lan4g1196 936 PRINTS Disease resistance protein signature 625 641 - -
Lan4g1196 936 PANTHER DISEASE RESISTANCE PROTEIN RP 31 893 IPR044974 GO:0006952
Lan4g1196 936 Gene3D - 424 515 IPR036388 -
Lan4g1196 936 Pfam NB-ARC domain 177 426 IPR002182 GO:0043531
Lan4g1196 936 CDD RX-CC_like 2 131 IPR038005 -
Lan4g1196 936 Gene3D - 160 329 IPR027417 -
Lan4g1196 936 Gene3D - 5 117 - -
Lan4g1196 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 438 IPR027417 -
Lan4g1196 936 Gene3D Ribonuclease Inhibitor 545 926 IPR032675 -
Lan4g1196 936 Coils Coil 31 51 - -
Lan4g1196 936 Pfam Rx N-terminal domain 6 91 IPR041118 -
Lan4g1196 936 Gene3D - 335 423 IPR042197 -
Lan4g1196 936 SUPERFAMILY L domain-like 502 892 - -
Lan4g1196 936 PANTHER - 31 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1196 Lan-Chr4 19330864 19333674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1196 195 510 WRKY Transcription Factor Family AT5G45050 25.938 8.96e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1196 K13457 - gmx:100801561 944.495