Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1192 ATGGCGTCGTCGAAAGTAGTAGTAGCGACGAATCCGGATCAGCGACGAAACTCATCTTCTTCCTCTTCTTCAATGTCTTCTTCTTCTCATCATTCCCTTCCTTCCCTTTTCCTTAATCTCTCCGATTCCGATCACCACCATCACCCCATGGACGACCTCCTCAATTCCATCTACCACACCGACGCCGCCGCTCCTCCTCCTCCTCCTTCCAGAACCGCCGACGAGGTTTGGAAAGAGATCGTCGCCGGTAATTCTAGTGGGACCCACCAGAATAATAACAATAATAGTAACAGTGGGGTTTTGGATGTGGTGACATTAGAGGATTACTTGATCAAAGAAAGAGTTATTCCTAATCCTTCCACCGGCGTAACGACGGCGATGGTTCAGTTTGGGAATGGGGTTGATGGCACGGTGGTTGGAACATCAGGTGGAGGAGGAGGGAAAGGGAAGAGAAAGGTTATCGAAGAAACAATTGATAAAGCAACTCTTCAGAAACAGAGAAGGATGATTAAGAATCGCGAATCTGCTGCTAGGTCCAGGGAACGAAAGCAGGCTTATACATCTGAGCTTGAGTATCTTGTTCATCAGCTGGAAGAAGAGAATGCCCGATTATTGAATGAAACGGCTGATAAGCAACGGCAGAGATTCAAACAGCTTATGGAGTGCATCATCCCAATTGAGGAGAGGCCTGAACCGCCAAAACGGAGTTTTCGTAGAACGGATTCAGCCCAATCAATATGA 741 0.4737 MASSKVVVATNPDQRRNSSSSSSSMSSSSHHSLPSLFLNLSDSDHHHHPMDDLLNSIYHTDAAAPPPPPSRTADEVWKEIVAGNSSGTHQNNNNNSNSGVLDVVTLEDYLIKERVIPNPSTGVTTAMVQFGNGVDGTVVGTSGGGGGKGKRKVIEETIDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEEENARLLNETADKQRQRFKQLMECIIPIEERPEPPKRSFRRTDSAQSI* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1192 246 Pfam bZIP transcription factor 161 208 IPR004827 GO:0003700|GO:0006355
Lan4g1192 246 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8 244 IPR043452 GO:0003700|GO:0045893
Lan4g1192 246 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 167 182 IPR004827 GO:0003700|GO:0006355
Lan4g1192 246 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 214 IPR004827 GO:0003700|GO:0006355
Lan4g1192 246 SUPERFAMILY Leucine zipper domain 164 214 IPR046347 GO:0003700|GO:0006355
Lan4g1192 246 Coils Coil 187 215 - -
Lan4g1192 246 Gene3D - 163 221 - -
Lan4g1192 246 SMART brlzneu 160 222 IPR004827 GO:0003700|GO:0006355
Lan4g1192 246 PANTHER OS05G0437700 PROTEIN 8 244 - -
Lan4g1192 246 MobiDBLite consensus disorder prediction 1 33 - -
Lan4g1192 246 MobiDBLite consensus disorder prediction 227 246 - -
Lan4g1192 246 CDD bZIP_plant_BZIP46 164 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1192 Lan-Chr4 19222092 19226440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1192 71 244 bZIP Transcription Factor Family AT1G03970 41.053 9.79e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan4g1192 bZIP_1 1.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1192 K14432 - gmx:100101890 179.104