Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1173 ATGTCTGACAATTCCCAAACTTCATTCTTCCCCGGATTCCGATTCCACCCTACCGACGAAGAACTCGTCCGATTCTACCTTAAGCGCAAGCTCACCGGTAAACACTTCCGATTTGATCCCATCGCTGAAGTTGATGTCTACAAGAAAGAACCATGGGACCTTCCTCACATGTCGAAGCTGAAAACGAGGGATTTGGAATGGTACTTCTACAGTGCACTGGACAAGAAGTATGGGAATGGCTCTAGGACAAAGCGGATCACTGAGAAAGGTTACTGGAAAACAACGGGAAAGGATCGTCCGATCAAGCAAGGAATCCGCGTCGTTGGAATGAAGAAGACTCTTGTTTACCATGCTGGTCGTGCGCCTCATGGCGATCGTACCAATTGGGTGATGCATGAGTATAAACTTGTTGATGAGCAATTGGCTCAAGCTGGAATTCTGCTGGATGGTCTTGTGCTGTGCAGGATTTTCGAGAAGAGCGGTGCTGGTCCGAAGAATGGGGAGAAGTATGGTGCTCCTTTGATTGAGGAAGAATGGGAAGATGATGAGGTGGCTCCTGTACCCAGTGCTGGTGATAAGGTGTCACATGAAGTGCTTGCTATTGACCCTTTTCTTGAAACTAACGACTTTGAGAAGGTTGATATGGTTGTGGCAATTGAAAATGCTGGTCCTCCATCAAACTTTTATCATGGGGAGTGTAGTAACTATCCTGAGAATTCACAAGATCCCGTTAAAGATCAGAAGCCATTGGAAGGCAATATTGGACTTTCTGAGCCTCAAAACGGCCAGCTTTCTGATACTGCTGAGCAATATACTGTGGAAGCCTCTTCTATAAAAGATGGTAACAGTGGTGAACTGGGAAATATTGAGAATGCTTTCGATTTCGATTTTACTTTTGATGATCTAGATATATACTTTAATGGGGCTGATTATCCTCTAATTGATGATACTGGATCATTCCTGGAAACCAAAGATCTTGCAAATCCATGTGGGGTCAATCCCACTGAGGCAGATCCTTCTGGCACTGTTATGATAGATGAGTATCTTTCTTACTCGGATGATGATATATCCAAGTATTTATCTTTTGATTCTCCTCTATCTGCGGAGAGTGAAAACTCCATTCCTGACCAGAAGCCACTTATTCAGCAGAATGCGGAGGGAGTTAACAATGGTATTCCCATGTCTAGCAAACATGATTTTGAAGCACTTTCCAGCAATGAAGCTTCTTCAAAGCAGAATCCACAACCTCTATCAGCAGGAATTACAAATCCAGTTGTGAAGCAGGCCAATAAACTGTTGGCTAGCATACCTGCTCCTCCTGCATTTGCTTCAGAGTTTCCGCCTAAGCACATTGCTCTTGGGCTCGCAGCTCAGTCTTCCAGTTCAGCTCATGTCACTGCAGGCATGATCAGCATCACAGACATTACTTCTACAGGCAATGTGATGGATAAGAATGGACGGGTGAAGGCCATGATATCTACCGAGTTTTCTCAGTCTGACATTTACTCTGTTACATTGATACCTGTTTTGGGTTTGCTCTCTAGGAAGACTGCATTTGTGCTGTCCCATGAATGGGTTTTCTTCATGATGATGCTCTTTCCGCTTCTGATTCTTTCACTGGTCTGCAAGTTTGGAAGTTTCACTTCTGCTGCTGGTAAATGA 1662 0.4428 MSDNSQTSFFPGFRFHPTDEELVRFYLKRKLTGKHFRFDPIAEVDVYKKEPWDLPHMSKLKTRDLEWYFYSALDKKYGNGSRTKRITEKGYWKTTGKDRPIKQGIRVVGMKKTLVYHAGRAPHGDRTNWVMHEYKLVDEQLAQAGILLDGLVLCRIFEKSGAGPKNGEKYGAPLIEEEWEDDEVAPVPSAGDKVSHEVLAIDPFLETNDFEKVDMVVAIENAGPPSNFYHGECSNYPENSQDPVKDQKPLEGNIGLSEPQNGQLSDTAEQYTVEASSIKDGNSGELGNIENAFDFDFTFDDLDIYFNGADYPLIDDTGSFLETKDLANPCGVNPTEADPSGTVMIDEYLSYSDDDISKYLSFDSPLSAESENSIPDQKPLIQQNAEGVNNGIPMSSKHDFEALSSNEASSKQNPQPLSAGITNPVVKQANKLLASIPAPPAFASEFPPKHIALGLAAQSSSSAHVTAGMISITDITSTGNVMDKNGRVKAMISTEFSQSDIYSVTLIPVLGLLSRKTAFVLSHEWVFFMMMLFPLLILSLVCKFGSFTSAAGK* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1173 553 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lan4g1173 553 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lan4g1173 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 4 549 - -
Lan4g1173 553 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lan4g1173 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 549 - -
Lan4g1173 553 MobiDBLite consensus disorder prediction 402 421 - -
Lan4g1173 553 MobiDBLite consensus disorder prediction 229 265 - -
Lan4g1173 553 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1173 Lan-Chr4 18805294 18808599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1173 1 538 NAC Transcription Factor Family AT5G04410 40.407 5.55e-119 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan4g1173 NAM 3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1173 - - lang:109338424 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1173 4 18805294 18808599 Lan4g1173 4 18805294 18808599 ECH