Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1159 ATGTTGGAGATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAGGGGGATTCATCTTCCAATGGTGGTGGTGGTGGGAATATACAGAGATCAAAGAGCTTTGCTTTTAGAGCTCCTCAGGAGAATTACTCTATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTAGTGAGGGCAAAGAAAAAGGACACAGGAGCAGTGTATGCTTTGAAGATTATGGACAAAAAATTTATTACTAAAGAGAATAAAACTGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGAATTGTGCAGCTATATTTCACATTTCAAGACACGTTTTCTCTGTACATGGCACTTGAATCATGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAAGTCGTCTAACAGAAGCTGAGGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATCATTTGGGATTAATACATCGGGATATAAAGCCAGAGAACTTATTACTTACAGCTGAAGGACATATCAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGAACCGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGATGCACATTGTTTCAAATGCTTTCTGGAACATCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGGGAAATTCGATTTCCAGATTACCTTTCTGACGAAGCAAGAGACCTCATCGACCGGCTATTGGATTCTGACCCCAGCAGAAGACTAGGTGCAGGATCTGGTGGTTATGATGCTTTGAAACGGCATCCATTTTTCAAGGGGATTGACTGGAATAACTTAAGGGCACAAACTCCGCCAAAACTTGCTCTGGAGCCGGGGACTCCTTCACCAGAGCGTGATGATGGTCAGGAGTCATCGTGGAATCCCTCTCACACAGGGGACAGTTATGCTAGACAACCTGATGGTGCTACATCATCTTCTGAGGAGACTGGGCACATAACCAGGCTAGCTTCAATTGATTCATTTGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTATTCTTATGATCTCTACAGTGAAGAAATTTCGGAAACTAACAAGCAAGAAGGTGCAGCTCCTCCTTACCAACAAACCGAAGTTATTCTATGTGGATCCGTCAAAGCTAACTGGGAAGGGAGATATAATATGGTCTGACAATTCAAATGATTTAAGCATCCAAGTGACTAGTCCCTCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCCTTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGGCTTCAAAACAGGTGTTTCACTTCAGCAACAGTAGACCAATATTCTCATGGAGCTAATGCTTGA 1521 0.4195 MLEMEKDFDSKLKIQGDSSSNGGGGGNIQRSKSFAFRAPQENYSIQDFELGKIYGVGSYSKVVRAKKKDTGAVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVQLYFTFQDTFSLYMALESCEGGELFDQITRKSRLTEAEARFYAAEVVDALEYIHHLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLFQMLSGTSPFKDASEWLIFQRIIAREIRFPDYLSDEARDLIDRLLDSDPSRRLGAGSGGYDALKRHPFFKGIDWNNLRAQTPPKLALEPGTPSPERDDGQESSWNPSHTGDSYARQPDGATSSSEETGHITRLASIDSFDSKWQQFLDPGESILMISTVKKFRKLTSKKVQLLLTNKPKLFYVDPSKLTGKGDIIWSDNSNDLSIQVTSPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNRCFTSATVDQYSHGANA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1159 506 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1159 506 Gene3D Transferase(Phosphotransferase) domain 1 132 328 - -
Lan4g1159 506 SMART serkin_6 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1159 506 MobiDBLite consensus disorder prediction 326 373 - -
Lan4g1159 506 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 22 486 - -
Lan4g1159 506 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 486 - -
Lan4g1159 506 CDD STKc_PDK1 46 315 IPR039046 GO:0004674
Lan4g1159 506 Gene3D Phosphorylase Kinase; domain 1 46 131 - -
Lan4g1159 506 Coils Coil 470 490 - -
Lan4g1159 506 SUPERFAMILY Protein kinase-like (PK-like) 45 354 IPR011009 -
Lan4g1159 506 Pfam PH domain 387 490 IPR033931 -
Lan4g1159 506 ProSiteProfiles Protein kinase domain profile. 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1159 506 MobiDBLite consensus disorder prediction 342 373 - -
Lan4g1159 506 MobiDBLite consensus disorder prediction 1 26 - -
Lan4g1159 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lan4g1159 506 SUPERFAMILY PH domain-like 309 493 - -
Lan4g1159 506 Gene3D - 360 498 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1159 Lan-Chr4 18419619 18427225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1159 1 490 AGC Kinase Gene Family AT3G10540 81.504 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Lan4g1159 Pkinase 3.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1159 K06276 - gmx:100788780 862.062