Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1156 ATGGCCACTCGAGACTACTCACCTCTCGATTCTCCCCCTCACGCGCAGCCCCATCTTCAGGCATCCACGCGCCACCACTTCCCTTCCCCATCTTCCTCCACTCCCCCACCCGATTCAACCACCGCCGACTACTACCACCACCCCTCCTTCTCCGACATCGCAGATGACTCGTCCGATCATGCCAAATCCACCTCCGCCGTCAACACCCCCAATTCCAAGCGCTCCTCCTCCGCTGGACCCACCGCCGGAGGAAACGGCTCATACCACTATAACAAGAAGAAATCAAAGCCCTCCTCCTCCTCCGGCGGCACCTTTCACGACAGTTCGTTTCACGGCGGAGATTACCGAAAGGACAGGGAGGAGTGGAGCGACACGGCGATCGCATGCCTCCTCGACGCGTACACGGAGAAGTTCAACCAGCTGAACCGCGGAAACCTCCGAGGCCGCGACTGGGAGGAGGTAGCGGAAGCCGTGGGAGAGAGGTGTGGAGCCGCCGTAGCTGGTGGTGGTGGTAGGTGTGATAGAAAGCACAAGTGTTATAAGAGTGTGGAACAGTGCAAGAACAAGATTGATAATTTGAAGAAAAGGTATAAGGTAGAGGTTCAGAGAATAGGGAATTTTGGAATTAGTACGAGTCATTGGCATTGGTTTAAGAAGATGGAAGCTATTGTTGGAAACTATGTCACTGTGAAGATTGTGTCTGATGATGAGAGAGGTCTCTCTAATTCTTCATATATGGCTAGACAATCTAAGAACAGTGATACATCTGTTGGCAGATATGCACCTAGCAATGCTATCGTGGCGACTAACCTCAAACCGAAGCCCACATCAAACTTGAAATGGCATAGAGTTTTGTTTAAAATTAGCGGTTCTGCATTGGCTGGAAACTGCCAGAACATTGACCCGAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTTGCTATAGTCGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTTCTACGGGTTTGGATAGACCTACCGCGTACCAAATTGGTATGATGGCAACAGTTATGAATTCTATTTTGCTTCAATCTGCATTGGAGAAGTTGGGTGTTGAGGCATGTGTGCAAAGTGTATTTTCTATTCCAGAGGCTGCTGAACCATATAGCAGGCAACGAGCTATCAGACACCTTGAGAAAGGAAGGGTTGTCATATTTGGCGGTGTCGGTGCTGGCACTGGAAATCCACTTTTCACCACTGATACAGCTGCCGCTCTCAGAGCTTCCGAGCTTAATGCAGATGTGGTTCTGAAAGGTACTAATGTTAACGGGGTCTTGGATTCTAATCCACGTAATGATGGTGTAACACTTGATCACATTTCTTTTAGAGAAGTTGTTTCTAGGGGCCTCACCTCCATATCCATGGATATGATGGCACTAGCATACTGTGAAGAGAATGGAATACCTGTTGTAATCTTCAATATGCTTGAACCTGGGAATGTATCAAGAGCACTATGTGGAGATCAAGTTGGCACTTTGATCGATCAAACAGGAAGAGTCGAGCATCGGATTCCTGGTTCATCATGTATATAA 1593 0.489 MATRDYSPLDSPPHAQPHLQASTRHHFPSPSSSTPPPDSTTADYYHHPSFSDIADDSSDHAKSTSAVNTPNSKRSSSAGPTAGGNGSYHYNKKKSKPSSSSGGTFHDSSFHGGDYRKDREEWSDTAIACLLDAYTEKFNQLNRGNLRGRDWEEVAEAVGERCGAAVAGGGGRCDRKHKCYKSVEQCKNKIDNLKKRYKVEVQRIGNFGISTSHWHWFKKMEAIVGNYVTVKIVSDDERGLSNSSYMARQSKNSDTSVGRYAPSNAIVATNLKPKPTSNLKWHRVLFKISGSALAGNCQNIDPKVAMQIAREVATACRLGVEVAIVVGGRNFFCGDAWVSSTGLDRPTAYQIGMMATVMNSILLQSALEKLGVEACVQSVFSIPEAAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADVVLKGTNVNGVLDSNPRNDGVTLDHISFREVVSRGLTSISMDMMALAYCEENGIPVVIFNMLEPGNVSRALCGDQVGTLIDQTGRVEHRIPGSSCI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1156 530 PANTHER URIDYLATE KINASE 2 520 - -
Lan4g1156 530 Gene3D - 273 522 IPR036393 -
Lan4g1156 530 MobiDBLite consensus disorder prediction 60 84 - -
Lan4g1156 530 Coils Coil 183 203 - -
Lan4g1156 530 Pfam Myb/SANT-like DNA-binding domain 119 223 IPR044822 -
Lan4g1156 530 MobiDBLite consensus disorder prediction 91 107 - -
Lan4g1156 530 CDD AAK_UMPK-PyrH-Ec 283 515 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lan4g1156 530 PANTHER KINASE, PUTATIVE-RELATED 2 520 - -
Lan4g1156 530 Gene3D - 122 199 - -
Lan4g1156 530 Pfam Amino acid kinase family 283 494 IPR001048 -
Lan4g1156 530 MobiDBLite consensus disorder prediction 1 113 - -
Lan4g1156 530 Hamap Uridylate kinase [pyrH]. 279 515 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lan4g1156 530 SUPERFAMILY Carbamate kinase-like 280 514 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1156 Lan-Chr4 18355885 18359199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1156 99 230 Trihelix Transcription Factor Family AT3G14180 37.121 4.43e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g1156 AA_kinase 4.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1156 - - lang:109346074 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1156 4 18355885 18359199 Lan4g1156 4 18355885 18359199 ECH