Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1137 ATGCATATGAAAACCCAGTTTTTCTTTTTCTTAATCTTCTTCTGTTACATGGGTTGTTCCTATAATGGTGTTAGTTTTGCAGCAAATGATGAAGCATCAGCATTGCTTTCTGTAAAAGAAGGTCTAATTGATCCATTGAACAACCTCCATGATTGGAATTTTGATGCAGTTCATTGCAATTGGACTGGTGTGTGGTGTAATTCTGCTGGAGAAGTTGAGAAGCTTGATCTTTCTCACATGAATCTGAGTGGAAAAGTTTCCAATGAGATACAAAGGCTGAAAAGTCTTAATTCTCTTAACATATGCTGCAATGGGCTCTCATCATCATTGTCAAATTCTATAACCAATCTCACCACACTCAAGAGTCTTGATGTGAGCCAGAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAAGGTTTCAGGGCTTGTGACCTTAAATGCATCCAGCAACAGTTTCTCAGGTTTTGTTCCTGAGGACCTTGGAAATGTGTCTTCCTTAGAGACCCTTGATTTTAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAAAGACATTGGGCAACTTGCATAAGTTGAAGTTTCTTGGTCTATCTGGGAATAATCTCACTGGTGAAATCCCAGGGGAGCTAGGAAAACTTTCATCATTGGAGACTATGATCATTGGCTACAATGCATTTGAAGGAGGGATTCCTGCAGAGTTTGGAAATCTCACCAATCTTAAGTATCTTGATATAGCAGATGGTAATCTTGGTGGTGAGATTCCAGAAGAGTTGGGAAGGCTCAAGTTATTGGATACAGTTTTCTTATACAAGAACAATTTTGAAGGCATGATTCCGAAAGCAATTAGCAACATGACTTCATTGGTGTTGCTGGATCTCTCAGATAACATGTTGTCAGGAAATATTCCAGCTGAAGTAAGTGAGTTGAAGAATTTGCAGCTTCTGAACTTGATGCGAAATCGGCTATCCGGTCCTGTGCCTTCTGGCCTTGGAAATTTGCCTCAACTTGAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGACATTGCCTGGTAACCTTGGTAAGAATTCTCCATTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGGTTCCCGAAACTCTATGCACTAAGGGCAATCTCACTAAGCTTATACTTTTCAATAATGCATTCTTGGGTCCAATTCCAGAAAGCCTATCGAAATGTCCTTCGCTTGTTCGTGTCCGAATTCATAACAATTTTCTTTCCGGCACGATTCCTGTAGGACTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAATAATAGTCTCACTGGTAGAATTCCTGATGACGTTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCGAAAAACAACCTTCACTCTTCTCTTCCTTCAACCATTGTTTCCATTCCAAATTTGCAAACTTTCATAGTCTCCAACAACAACCTGGAAGGTGAAATCCCAGAGCAATTCCAGGATTGTCCCTCACTTGGTGTTCTTGACCTCTCATCAAATCATTTCTTTGGAAGCATTCCGAAAAGCATTGCTTCATGTCAGAAATTGGTTAGCTTGAACCTAAAGAACAATAAACTCAGTGGTGAAATCCCAAAAGCATTAGCAAGCATGCCTACACTGGCCATTCTTGATCTTGCTAACAACTCTCTAACCGGTCAAATACCCCAAAATTTCGGCATCTCTCCGGCTCTAGAAATATTTAATGTCTCATACAACAAGCTAGATGGTCCTGTCCCAGAAAATGGTGTGCTAAGAACAATAAACCCAAATGATATTATGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCCTGCATGTGGCCTAACATTCGCGTATCCTTCGAGACATCGGAACCCACAAACAAAGCCAATTATTACAGGATGGATCATTGCAATATTATCAATCTTAGCCATTGGGATTGCAATTTTGGCAGCAAGATCTTTATACACAAGGTGGTACAATAATGGATTATGTTTCAGTGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAGAGGCTTGATTTTACAAGTACTGACATTTTAGCTTGCATCAAGGAAACAAATGTGATCGGCATGGGTGCAACCGGGGTTGTTTATAAGGCTGAGGTACCACAATCAAGTACAGTTGTGGCAGTTAAAAAACTGTGGAGATCATCGGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGGGAGGTGAATCTTTTAGGAAGACTAAGGCATAGGAACATTGTTAGACTACTAGGCTTTCTTTATAATAACACTGATGTGATGATAGTTTATGAATTCATGCTTAATGGAAATCTTGGAGATGCCTTGCATGGCAAGCAAACAGCAGGAACATTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCACTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCTATTATCCATAGAGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTCGGGTTAGCGAAAATGATGATCAGGAAGAATGAAACAGTCTCCATGATTGCTGGTTCCTATGGATACATTGCCCCTGAATATGGATACTCTTTGAAGGTGGATGAAAAGATTGACATTTACAGTTATGGAGTAGTTTTACTAGAGCTTCTCACAGGAAAGAGGCCATTAGATCCAGAATTTGAAGAGTCTATAGATATTGTAGGATGGATTAGAAGGAAAATGGACAAAGGATGTTCAGAAAAAGCATTAGACCCAAGTGTAGGAAACTGCATGCATGTTCAAGAAGAGATGCTTTTGGTTCTCAGAATAGCACTTCTTTGCACTGCTAAGATCCCCAAAGATAGACCCTCAATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTAGGAGAAAAAGCAGTGTCAGCACTGAAACATTAGCACCTAACAAGGAGATGTTAGTTATTAGCACATCACCAATTAATGGTCTTGTGTAG 3045 0.4039 MHMKTQFFFFLIFFCYMGCSYNGVSFAANDEASALLSVKEGLIDPLNNLHDWNFDAVHCNWTGVWCNSAGEVEKLDLSHMNLSGKVSNEIQRLKSLNSLNICCNGLSSSLSNSITNLTTLKSLDVSQNFFIGDFPLGLGKVSGLVTLNASSNSFSGFVPEDLGNVSSLETLDFRGSFFEGSVPKTLGNLHKLKFLGLSGNNLTGEIPGELGKLSSLETMIIGYNAFEGGIPAEFGNLTNLKYLDIADGNLGGEIPEELGRLKLLDTVFLYKNNFEGMIPKAISNMTSLVLLDLSDNMLSGNIPAEVSELKNLQLLNLMRNRLSGPVPSGLGNLPQLEVLELWNNSLSGTLPGNLGKNSPLQWLDVSSNSLSGEVPETLCTKGNLTKLILFNNAFLGPIPESLSKCPSLVRVRIHNNFLSGTIPVGLGKLGKLQRLELANNSLTGRIPDDVASSTSLSFIDFSKNNLHSSLPSTIVSIPNLQTFIVSNNNLEGEIPEQFQDCPSLGVLDLSSNHFFGSIPKSIASCQKLVSLNLKNNKLSGEIPKALASMPTLAILDLANNSLTGQIPQNFGISPALEIFNVSYNKLDGPVPENGVLRTINPNDIMGNAGLCGGVLPACGLTFAYPSRHRNPQTKPIITGWIIAILSILAIGIAILAARSLYTRWYNNGLCFSERFYKGSKGWPWRLMAFQRLDFTSTDILACIKETNVIGMGATGVVYKAEVPQSSTVVAVKKLWRSSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNNTDVMIVYEFMLNGNLGDALHGKQTAGTLLVDWVSRYNIALGVAQGLAYLHHDCHPPIIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLDPEFEESIDIVGWIRRKMDKGCSEKALDPSVGNCMHVQEEMLLVLRIALLCTAKIPKDRPSMRDVIMMLGEAKPRRKSSVSTETLAPNKEMLVISTSPINGLV* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1137 1014 Gene3D Transferase(Phosphotransferase) domain 1 785 1003 - -
Lan4g1137 1014 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lan4g1137 1014 SMART LRR_typ_2 285 309 IPR003591 -
Lan4g1137 1014 SMART LRR_typ_2 477 500 IPR003591 -
Lan4g1137 1014 SMART LRR_typ_2 189 213 IPR003591 -
Lan4g1137 1014 SMART LRR_typ_2 237 261 IPR003591 -
Lan4g1137 1014 SMART LRR_typ_2 429 453 IPR003591 -
Lan4g1137 1014 SMART LRR_typ_2 333 357 IPR003591 -
Lan4g1137 1014 SUPERFAMILY L domain-like 28 245 - -
Lan4g1137 1014 ProSiteProfiles Protein kinase domain profile. 703 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1137 1014 Pfam Leucine rich repeat 264 322 IPR001611 GO:0005515
Lan4g1137 1014 Pfam Leucine rich repeat 478 538 IPR001611 GO:0005515
Lan4g1137 1014 SUPERFAMILY Protein kinase-like (PK-like) 699 980 IPR011009 -
Lan4g1137 1014 Gene3D Ribonuclease Inhibitor 27 250 IPR032675 -
Lan4g1137 1014 Pfam Protein kinase domain 705 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1137 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Lan4g1137 1014 PANTHER UNNAMED PRODUCT 9 993 - -
Lan4g1137 1014 Gene3D Phosphorylase Kinase; domain 1 694 784 - -
Lan4g1137 1014 Gene3D Ribonuclease Inhibitor 251 357 IPR032675 -
Lan4g1137 1014 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Lan4g1137 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 993 - -
Lan4g1137 1014 SMART serkin_6 703 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1137 1014 Gene3D Ribonuclease Inhibitor 358 621 IPR032675 -
Lan4g1137 1014 SUPERFAMILY RNI-like 195 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1137 Lan-Chr4 17880735 17884636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1137 6 1014 Receptor kinase-like Gene Family AT1G08590 59.710 0.0 1174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan4g1137 Pkinase 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1137 - - lang:109344669 1647.48