Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1136 ATGGGTTGTTCCTATAATGGTGTTAGTTTTGCAGCAAATGATGAAGCATCAGCATTGCTTTCTGTAAAAGAAGGTCTAATTGATCCATTGAACAACCTCCATGATTGGAATTTTGATGCAGTTCATTGCAATTGGACTGGTGTGTGGTGTAATTCTGCTGGAGAAGTTGAGAAGCTTGATCTTTCTCACATGAATCTGAGTGGAAAAGTTTCCAATGAGATACAAAGGCTGAAAAGTCTTAATTCTCTTAACATATGCTGCAATGGGCTCTCATCATCATTGTCAAATTCTATAACCAATCTCACCACACTCAAGAGTCTTGATGTGAGCCAGAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAAGGTTTCAGGGCTTGTGACCTTAAATGCATCCAGCAACAGTTTCTCAGGTTTTGTTCCTGAGGACCTTGGAAATGTGTCTTCCTTAGAGACCCTTGATTTTAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAAAGACATTGGGCAACTTGCATAAGTTGAAGTTTCTTGGTCTATCTGGGAATAATCTCACTGGTGAAATCCCAGGGGAGCTAGGAAAACTTTCATCATTGGAGACTATGATCATTGGCTACAATGCATTTGAAGGAGGGATTCCTGCAGAGTTTGGAAATCTCACCAATCTTAAGTATCTTGATATAGCAGATGGTAATCTTGGTGGTGAGATTCCAGAAGAGTTGGGAAGGCTCAAGTTATTGGATACAGTTTTCTTATACAAGAACAATTTTGAAGGCATGATTCCGAAAGCAATTAGCAACATGACTTCATTGGTGTTGCTGGATCTCTCAGATAACATGTTGTCAGGAAATATTCCAGCTGAAGTAAGTGAGTTGAAGAATTTGCAGCTTCTGAACTTGATGCGAAATCGGCTATCCGGTCCTGTGCCTTCTGGCCTTGGAAATTTGCCTCAACTTGAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGACATTGCCTGGTAACCTTGGTAAGAATTCTCCATTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGGTTCCCGAAACTCTATGCACTAAGGGCAATCTCACTAAGCTTATACTTTTCAATAATGCATTCTTGGGTCCAATTCCAGAAAGCCTATCGAAATGTCCTTCGCTTGTTCGTGTCCGAATTCATAACAATTTTCTTTCCGGCACGATTCCTGTAGGACTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAATAATAGTCTCACTGGTAGAATTCCTGATGACGTTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCGAAAAACAACCTTCACTCTTCTCTTCCTTCAACCATTGTTTCCATTCCAAATTTGCAAACTTTCATAGTCTCCAACAACAACCTGGAAGGTGAAATCCCAGAGCAATTCCAGGATTGTCCCTCACTTGGTGTTCTTGACCTCTCATCAAATCATTTCTTTGGAAGCATTCCGAAAAGCATTGCTTCATGTCAGAAATTGGTTAGCTTGAACCTAAAGAACAATAAACTCAGTGGTGAAATCCCAAAAGCATTAGCAAGCATGCCTACACTGGCCATTCTTGATCTTGCTAACAACTCTCTAACCGGTCAAATACCCCAAAATTTCGGCATCTCTCCGGCTCTAGAAATATTTAATGTCTCATACAACAAGCTAGATGGTCCTGTCCCAGAAAATGGTGTGCTAAGAACAATAAACCCAAATGATATTATGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCCTGCATGTGGCCTAACATTCGCGTATCCTTCGAGACATCGGAACCCACAAACAAAGCCAATTATTACAGGATGGATCATTGCAATATTATCAATCTTAGCCATTGGGATTGCAATTTTGGCAGCAAGATCTTTATACACAAGGTGGTACAATAATGGATTATGTTTCAGTGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAGAGGCTTGATTTTACAAGTACTGACATTTTAGCTTGCATCAAGGAAACAAATGTGATCGGCATGGGTGCAACCGGGGTTGTTTATAAGGCTGAGGTACCACAATCAAGTACAGTTGTGGCAGTTAAAAAACTGTGGAGATCATCGGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGGGAGGTGAATCTTTTAGGAAGACTAAGGCATAGGAACATTGTTAGACTACTAGGCTTTCTTTATAATAACACTGATGTGATGATAGTTTATGAATTCATGCTTAATGGAAATCTTGGAGATGCCTTGCATGGCAAGCAAACAGCAGGAACATTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCACTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCTATTATCCATAGAGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTCGGGTTAGCGAAAATGATGATCAGGAAGAATGAAACAGTCTCCATGATTGCTGGTTCCTATGGATACATTGCCCCTGGTGAGTTACTAGTTCATACATCTTACCTTAATCTTTCAATCACTACTTTGTTTTTCAGAACATTTACGGCAAGTAGGATACTTAAAAGTAAGGGTGAGCATTCTGATAAGACTTGTAACTTATCCAACCCTAAATGTTGGTGA 2736 0.405 MGCSYNGVSFAANDEASALLSVKEGLIDPLNNLHDWNFDAVHCNWTGVWCNSAGEVEKLDLSHMNLSGKVSNEIQRLKSLNSLNICCNGLSSSLSNSITNLTTLKSLDVSQNFFIGDFPLGLGKVSGLVTLNASSNSFSGFVPEDLGNVSSLETLDFRGSFFEGSVPKTLGNLHKLKFLGLSGNNLTGEIPGELGKLSSLETMIIGYNAFEGGIPAEFGNLTNLKYLDIADGNLGGEIPEELGRLKLLDTVFLYKNNFEGMIPKAISNMTSLVLLDLSDNMLSGNIPAEVSELKNLQLLNLMRNRLSGPVPSGLGNLPQLEVLELWNNSLSGTLPGNLGKNSPLQWLDVSSNSLSGEVPETLCTKGNLTKLILFNNAFLGPIPESLSKCPSLVRVRIHNNFLSGTIPVGLGKLGKLQRLELANNSLTGRIPDDVASSTSLSFIDFSKNNLHSSLPSTIVSIPNLQTFIVSNNNLEGEIPEQFQDCPSLGVLDLSSNHFFGSIPKSIASCQKLVSLNLKNNKLSGEIPKALASMPTLAILDLANNSLTGQIPQNFGISPALEIFNVSYNKLDGPVPENGVLRTINPNDIMGNAGLCGGVLPACGLTFAYPSRHRNPQTKPIITGWIIAILSILAIGIAILAARSLYTRWYNNGLCFSERFYKGSKGWPWRLMAFQRLDFTSTDILACIKETNVIGMGATGVVYKAEVPQSSTVVAVKKLWRSSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNNTDVMIVYEFMLNGNLGDALHGKQTAGTLLVDWVSRYNIALGVAQGLAYLHHDCHPPIIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPGELLVHTSYLNLSITTLFFRTFTASRILKSKGEHSDKTCNLSNPKCW* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1136 911 SMART LRR_typ_2 413 437 IPR003591 -
Lan4g1136 911 SMART LRR_typ_2 461 484 IPR003591 -
Lan4g1136 911 SMART LRR_typ_2 173 197 IPR003591 -
Lan4g1136 911 SMART LRR_typ_2 317 341 IPR003591 -
Lan4g1136 911 SMART LRR_typ_2 221 245 IPR003591 -
Lan4g1136 911 SMART LRR_typ_2 269 293 IPR003591 -
Lan4g1136 911 ProSiteProfiles Protein kinase domain profile. 687 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1136 911 Pfam Leucine rich repeat N-terminal domain 12 51 IPR013210 -
Lan4g1136 911 SUPERFAMILY L domain-like 12 229 - -
Lan4g1136 911 Gene3D Ribonuclease Inhibitor 315 606 IPR032675 -
Lan4g1136 911 SMART serkin_6 687 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1136 911 Pfam Protein kinase domain 689 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1136 911 Gene3D Transferase(Phosphotransferase) domain 1 677 876 - -
Lan4g1136 911 PANTHER UNNAMED PRODUCT 7 865 - -
Lan4g1136 911 Gene3D Ribonuclease Inhibitor 249 314 IPR032675 -
Lan4g1136 911 Gene3D Ribonuclease Inhibitor 174 248 IPR032675 -
Lan4g1136 911 SUPERFAMILY RNI-like 179 553 - -
Lan4g1136 911 Gene3D Ribonuclease Inhibitor 11 169 IPR032675 -
Lan4g1136 911 Pfam Leucine rich repeat 248 306 IPR001611 GO:0005515
Lan4g1136 911 Pfam Leucine rich repeat 462 522 IPR001611 GO:0005515
Lan4g1136 911 ProSitePatterns Protein kinases ATP-binding region signature. 693 717 IPR017441 GO:0005524
Lan4g1136 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lan4g1136 911 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 865 - -
Lan4g1136 911 SUPERFAMILY Protein kinase-like (PK-like) 683 870 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1136 Lan-Chr4 17877293 17880028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1136 13 864 Receptor kinase-like Gene Family AT1G08590 60.502 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan4g1136 Pkinase 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1136 - - lang:109344669 1744.17