Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1124 ATGGCAGCAGCACGGCGTCTCGGCGACCTTCAATCCGAACCCGGCAACAACATCTGTGTCGATTGCTCCCAAAAGAACCCTCAATGGGCCTCCGTCTCCTACGGCGTCTTCATGTGTCTCGAATGCTCCGGCAAGCACCGCGGCCTCGGCGTTCATATTTCCTTCGTACGATCCGTTAACATGGACTCCTGGTCCGAAATCCAGATCAAGAAAATGGAAGCTGGTGGCAATGACAAACTCCACGAGTTCCTTGCACGTTACGAAATCCCTAAGGAAATCGATATAGTCACAAAATATAACACCAATGCTGCTTCTGTGTATAGGAATCGAATCCAAGCGATCGCTGAAGGCCGCGGGTGGCGCGATCCTCCTGTCATTAAGGAGATTCTCACGGGAAAGCAGACCAGCGGTGGGGGTGGTAGTGGTGGTGGTGAGGGGGGAGGTTTTCGTAGGAATAACGGAGGGTGGGAGGATGATTGGGGTGTTGATGATAGTTTTGGGAATTCGGGTGATATTAGGCGTAACCGTTCGACCGGGGATTTCAAGAGAGGTGGTGGTGGTATGCCGGTGAGGTCGAGGTCGACGACGGACTTTGCGCGATCGGAATGGGAGGCTTCGGCGGCGAATAAGGAGAGTTTTTTTGCGAGGAAGATGGCGGAGAATGAATCAAGATCTGAGGAGCTTCCACCATCGAAGGGTGGAAAATATGTTGGGTTTGGATCGAGTCCCACACTTTCTTCTCAGAGGAGCAACCAGCAAAACGATTATTTTTCTGTCGTTTCTCAGGGGATTGGTAAGTTGTCGTTGGTTGCTGCCTCTGCGGCTCAAGAGATCACTTCTAAGGTCAAAGAAGGTGGTTATGATGACAAAGTCAATGTTGTCTCTCAGAAGACATCAGAGATTGGACAAAAGACATGGGGTATAATGAAAGGGGTCTTGGCTATGGCTTCACAGAAGGTTGAGGAGTTGGCTTCAGATACTCCAAATTCCAAGACTAGTAACTTGCAGAGAAATGAGAATAATAGAAATGCTTCAAATCATAATTTCAATCAAGAGAACAAAGGCTTGAATTCTCCAATGGGAAAAGAACAATCGTCATCAGGGCAAGTTAAAACTCATAGCTCAATAAGCTCTTGGGATGACTGGGACAACAAAGATAGTAAGAAGGAAGAACCAGCTAAAGGATCAACTACTCATAACAATGATGATTGGGCTGGTTGGGATGATGCCAAAGATGATGGATTTGATGTCTTTTATGAAGGTGCGTCTAATAGGAAAGGTGCTGGTCATAACAAAAAATCAGATTCAACCTGGACAGGGGGTGGCTTTCACTAA 1335 0.4749 MAAARRLGDLQSEPGNNICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVNMDSWSEIQIKKMEAGGNDKLHEFLARYEIPKEIDIVTKYNTNAASVYRNRIQAIAEGRGWRDPPVIKEILTGKQTSGGGGSGGGEGGGFRRNNGGWEDDWGVDDSFGNSGDIRRNRSTGDFKRGGGGMPVRSRSTTDFARSEWEASAANKESFFARKMAENESRSEELPPSKGGKYVGFGSSPTLSSQRSNQQNDYFSVVSQGIGKLSLVAASAAQEITSKVKEGGYDDKVNVVSQKTSEIGQKTWGIMKGVLAMASQKVEELASDTPNSKTSNLQRNENNRNASNHNFNQENKGLNSPMGKEQSSSGQVKTHSSISSWDDWDNKDSKKEEPAKGSTTHNNDDWAGWDDAKDDGFDVFYEGASNRKGAGHNKKSDSTWTGGGFH* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1124 444 MobiDBLite consensus disorder prediction 404 419 - -
Lan4g1124 444 CDD ArfGap_ArfGap1 3 117 - -
Lan4g1124 444 SUPERFAMILY ArfGap/RecO-like zinc finger 5 111 IPR037278 -
Lan4g1124 444 MobiDBLite consensus disorder prediction 131 201 - -
Lan4g1124 444 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Lan4g1124 444 MobiDBLite consensus disorder prediction 378 397 - -
Lan4g1124 444 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 84 IPR001164 GO:0005096
Lan4g1124 444 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 443 IPR044519 GO:0005096|GO:0016192
Lan4g1124 444 MobiDBLite consensus disorder prediction 321 444 - -
Lan4g1124 444 MobiDBLite consensus disorder prediction 322 377 - -
Lan4g1124 444 Pfam Putative GTPase activating protein for Arf 6 99 IPR001164 GO:0005096
Lan4g1124 444 Gene3D Arf GTPase activating protein 2 124 IPR038508 -
Lan4g1124 444 MobiDBLite consensus disorder prediction 218 250 - -
Lan4g1124 444 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 443 - -
Lan4g1124 444 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Lan4g1124 444 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Lan4g1124 444 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1124 Lan-Chr4 17365667 17375444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1124 5 77 C2H2 Transcription Factor Family AT4G05330 51.351 3.38e-20 89.4